CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R012738
(
Geospiza fortis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Gfo_R012738
T028002_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R012738
BED ZF
292
325
SVYWDYALIVPLSQIVCIHCHQQPESRWTLVLVS
Links
Other
BED ZF
family TFs
Other
Geospiza fortis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG002099.1
Alligator sinensis
Alligator_sinensis_CCG002099.1
N
0.806
SGSM2
Anolis carolinensis
ENSACAG00000011801
N
0.742
Aan_R004292
Calypte anna
Aan_R004292
N
0.812
ENSFALG00000004762
Ficedula albicollis
ENSFALG00000004762
N
0.871
SGSM2
Gallus gallus
ENSGALG00000005737
N
0.839
ENSLACG00000018073
Latimeria chalumnae
ENSLACG00000018073
N
0.724
ENSMEUG00000015853
Macropus eugenii
ENSMEUG00000015853
N
0.793
SGSM2
Meleagris gallopavo
ENSMGAG00000008568
N
0.935
SGSM2
Monodelphis domestica
ENSMODG00000010704
N
0.710
Ogr16274
Ophisaurus gracilis
Ogr16274
N
0.742
SGSM2
Ornithorhynchus anatinus
ENSOANG00000008634
N
0.710
ENSPSIG00000013671
Pelodiscus sinensis
ENSPSIG00000013671
N
0.774
Pvit_02550
Pogona vitticeps
Pvit_02550
N
0.742
ENSSHAG00000011609
Sarcophilus harrisii
ENSSHAG00000011609
N
0.710
SGSM2
Taeniopygia guttata
ENSTGUG00000008737
N
0.871