Lus10032337.g (Linum usitatissimum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Lus10032337.g T028375_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10032337 BED ZF 532 592

Links

Other BED ZF family TFs
Other Linum usitatissimum TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_020_00067 Aquilegia coerulea Aquca_020_00067 N 0.714
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N 0.727
HAT Arabidopsis thaliana AT3G42170 N 0.767
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N 0.767
BRADI1G09660 Brachypodium distachyon BRADI1G09660 N 0.795
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.705
Bo4g137780 Brassica oleracea Bo4g137780 N 0.727
Bo6g018310 Brassica oleracea Bo6g018310 N 0.727
PK27100.1 Cannabis sativa PK27100.1 N 0.818
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N 0.750
Carubv10008021m.g Capsella rubella Carubv10008021m.g N 0.750
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.818
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.818
Cucsa.036140 Cucumis sativus Cucsa.036140 N 0.795
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.705
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.818
Thhalv10002435m.g Eutrema salsugineum Thhalv10002435m.g N 0.705
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.841
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.841
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.750
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.818
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.795
GLYMA16G32921 Glycine max GLYMA16G32921 N 0.727
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.818
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N 0.705
Gorai.010G061600 Gossypium raimondii Gorai.010G061600 N 0.750
Gorai.010G061500 Gossypium raimondii Gorai.010G061500 N 0.750
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.750
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.727
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.705
MDP0000394762 Malus domestica MDP0000394762 N 0.818
MDP0000197332 Malus domestica MDP0000197332 N 0.773
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.750
mgf025287m Mimulus guttatus mgf025287m N 0.818
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.750
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.750
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N 0.762
GSMUA_Achr10G16260_001 Musa acuminata GSMUA_Achr10G16260_001 N 0.837
OB08G27850 Oryza brachyantha OB08G27850 N 0.727
OB08G27840 Oryza brachyantha OB08G27840 N 0.705
OB03G40190 Oryza brachyantha OB03G40190 N 0.795
ORGLA05G0236800 Oryza glaberrima ORGLA05G0236800 N 0.795
ORGLA05G0072400 Oryza glaberrima ORGLA05G0072400 N 0.795
ORGLA03G0300400 Oryza glaberrima ORGLA03G0300400 N 0.795
BGIOSGA009862 Oryza indica BGIOSGA009862 N 0.795
BGIOSGA018468 Oryza indica BGIOSGA018468 N 0.795
BGIOSGA020445 Oryza indica BGIOSGA020445 N 0.795
OS03G0733400 Oryza sativa OS03G0733400 N 0.795
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.705
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.705
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.705
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.705
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.705
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.773
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.750
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.750
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.767
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N 0.744
POPTR_0018s12680 Populus trichocarpa POPTR_0018s12680 N 0.727
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.795
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.750
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.750
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.795
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.773
Si000401m.g Setaria italica Si000401m.g N 0.705
Si034159m.g Setaria italica Si034159m.g N 0.705
Si000431m.g Setaria italica Si000431m.g N 0.705
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.705
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.750
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.773
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.705
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.773
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.750
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.705
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.727
Sb08g005330 Sorghum bicolor Sb08g005330 N 0.727
TCM_027266 Theobroma cacao TCM_027266 N 0.705
TCM_038144 Theobroma cacao TCM_038144 N 0.773
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.705
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.727
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.727
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.705
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.705
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.727
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.818
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.727