CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J16563
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.J16563
T028584_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J16563.1.p
BED ZF
30
80
SKIWDEYRPIFVDGAIQSAECLYCHIHMSCRGADGQSNGTSHLWRHQKVCR
Pavir.J16563.1.p
BED ZF
130
174
SKVWKDFIPFYVEGRVQGADCVHCHKRLSADKGRSHLNRHTQTCP
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG13140
Fusarium solani
NechaG13140
N
gw1.32.130.1
Nectria haematococca
gw1.32.130.1
N
U727_0043261051
Penicillium solitum
U727_0043261051
N