CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold547-EXSNAP2012.7
(
Pristionchus exspectatus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
scaffold547-EXSNAP2012.7
T029674_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold547-EXSNAP2012.7
BED ZF
114
158
HPVWEFFRDLKLENGSSSVLCLHCGWTGEDRSPNNLRTHLKKSHS
Links
Other
BED ZF
family TFs
Other
Pristionchus exspectatus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10004715m.g
Citrus clementina
Ciclev10004715m.g
N
orange1.1g009215m.g
Citrus sinensis
orange1.1g009215m.g
N
Lus10031748.g
Linum usitatissimum
Lus10031748.g
N
cassava20476.m1
Manihot esculenta
cassava20476.m1
N