AMTR_s00009p00242790 (Amborella trichopoda)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AMTR_s00009p00242790 T030477_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.842 0.638
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM95037 bHLH 475 521

Links

Other bHLH family TFs
Other Amborella trichopoda TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10624 Aegilops tauschii F775_10624 N 0.875
F775_11347 Aegilops tauschii F775_11347 I 0.839
F775_11371 Aegilops tauschii F775_11371 I 0.842
F775_14190 Aegilops tauschii F775_14190 I 0.839
F775_18830 Aegilops tauschii F775_18830 N 0.875
F775_19744 Aegilops tauschii F775_19744 N 0.875
AMTR_s00025p00048410 Amborella trichopoda AMTR_s00025p00048410 I 0.842
Aquca_054_00130 Aquilegia coerulea Aquca_054_00130 I 0.842
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.851
GL3 Arabidopsis thaliana AT5G41315 I 0.851
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.851
BRADI1G10170 Brachypodium distachyon BRADI1G10170 I 0.842
BRADI1G54070 Brachypodium distachyon BRADI1G54070 I 0.842
BRADI2G47730 Brachypodium distachyon BRADI2G47730 I 0.845
Bo4g141990 Brassica oleracea Bo4g141990 I 0.838
Bra025508 Brassica rapa Bra025508 I 0.838
PK09702.1 Cannabis sativa PK09702.1 D 0.842
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.851
evm.TU.supercontig_52.26 Carica papaya evm.TU.supercontig_52.26 I 0.842
evm.TU.supercontig_537.2 Carica papaya evm.TU.supercontig_537.2 N 0.841
Ca_07836 Cicer arietinum Ca_07836 I 0.842
Ciclev10019118m.g Citrus clementina Ciclev10019118m.g I 0.842
orange1.1g037798m.g Citrus sinensis orange1.1g037798m.g I 0.842
Eucgr.H01487 Eucalyptus grandis Eucgr.H01487 I 0.842
Eucgr.H02385 Eucalyptus grandis Eucgr.H02385 I 0.841
Eucgr.H02396 Eucalyptus grandis Eucgr.H02396 I 0.845
Eucgr.H02398 Eucalyptus grandis Eucgr.H02398 I 0.845
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.851
Thhalv10028584m.g Eutrema salsugineum Thhalv10028584m.g I 0.842
gene27827-v1.0-hybrid Fragaria vesca gene27827-v1.0-hybrid I 0.842
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.838
GLYMA02G16670 Glycine max GLYMA02G16670 I 0.842
GLYMA03G30940 Glycine max GLYMA03G30940 I 0.859
GLYMA10G03140 Glycine max GLYMA10G03140 I 0.842
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I 0.839
Gorai.004G215900 Gossypium raimondii Gorai.004G215900 I 0.842
Gorai.007G136400 Gossypium raimondii Gorai.007G136400 I 0.842
MLOC_38470 Hordeum vulgare MLOC_38470 N 0.875
MLOC_64735 Hordeum vulgare MLOC_64735 I 0.842
MLOC_6900 Hordeum vulgare MLOC_6900 I 0.842
MLOC_70409 Hordeum vulgare MLOC_70409 I 0.845
LPERR01G24170 Leersia perrieri LPERR01G24170 I 0.845
LPERR04G17380 Leersia perrieri LPERR04G17380 N 0.875
LPERR04G17390 Leersia perrieri LPERR04G17390 N 0.862
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.851
LPERR07G06180 Leersia perrieri LPERR07G06180 I 0.845
LPERR08G11070 Leersia perrieri LPERR08G11070 N 0.875
Lus10011578.g Linum usitatissimum Lus10011578.g I 0.842
Lus10019247.g Linum usitatissimum Lus10019247.g I 0.842
MDP0000225680 Malus domestica MDP0000225680 I 0.842
MDP0000617077 Malus domestica MDP0000617077 I 0.842
cassava24625.valid.m1 Manihot esculenta cassava24625.valid.m1 I 0.842
cassava29522.valid.m1 Manihot esculenta cassava29522.valid.m1 I 0.842
MTR_1g072320 Medicago truncatula MTR_1g072320 I 0.842
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.899
GSMUA_Achr3G26180_001 Musa acuminata GSMUA_Achr3G26180_001 I 0.845
GSMUA_Achr3G30620_001 Musa acuminata GSMUA_Achr3G30620_001 I 0.845
GSMUA_Achr4G03160_001 Musa acuminata GSMUA_Achr4G03160_001 I 0.845
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N 0.878
GSMUA_Achr6G21490_001 Musa acuminata GSMUA_Achr6G21490_001 I 0.842
GSMUA_Achr7G27600_001 Musa acuminata GSMUA_Achr7G27600_001 I 0.845
GSMUA_Achr8G11430_001 Musa acuminata GSMUA_Achr8G11430_001 N 0.870
OBART01G20350 Oryza barthii OBART01G20350 N 0.875
OBART01G28080 Oryza barthii OBART01G28080 I 0.845
OBART04G21320 Oryza barthii OBART04G21320 N 0.875
OBART04G21370 Oryza barthii OBART04G21370 N 0.875
OBART07G07130 Oryza barthii OBART07G07130 I 0.845
OB01G30110 Oryza brachyantha OB01G30110 N 0.875
OB04G28350 Oryza brachyantha OB04G28350 N 0.875
OB04G28380 Oryza brachyantha OB04G28380 N 0.875
OB04G28390 Oryza brachyantha OB04G28390 N 0.875
ORGLA01G0232100 Oryza glaberrima ORGLA01G0232100 I 0.845
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N 0.875
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N 0.875
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N 0.875
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N 0.875
OGLUM01G32030 Oryza glumaepatula OGLUM01G32030 I 0.845
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N 0.875
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N 0.875
BGIOSGA003819 Oryza indica BGIOSGA003819 N 0.875
BGIOSGA003821 Oryza indica BGIOSGA003821 N 0.875
BGIOSGA004292 Oryza indica BGIOSGA004292 I 0.845
BGIOSGA014565 Oryza indica BGIOSGA014565 N 0.875
BGIOSGA014566 Oryza indica BGIOSGA014566 N 0.875
BGIOSGA014567 Oryza indica BGIOSGA014567 N 0.875
BGIOSGA015472 Oryza indica BGIOSGA015472 N 0.875
OLONG_009946 Oryza longistaminata OLONG_009946 N 0.875
OLONG_016958 Oryza longistaminata OLONG_016958 N 0.875
OLONG_016960 Oryza longistaminata OLONG_016960 N 0.875
OMERI01G18770 Oryza meridionalis OMERI01G18770 N 0.875
OMERI01G18860 Oryza meridionalis OMERI01G18860 N 0.875
OMERI04G17790 Oryza meridionalis OMERI04G17790 N 0.875
OMERI04G17820 Oryza meridionalis OMERI04G17820 N 0.875
OMERI07G05880 Oryza meridionalis OMERI07G05880 I 0.845
ONIVA01G22920 Oryza nivara ONIVA01G22920 N 0.839
ONIVA01G22980 Oryza nivara ONIVA01G22980 N 0.875
ONIVA01G32020 Oryza nivara ONIVA01G32020 I 0.845
ONIVA04G19650 Oryza nivara ONIVA04G19650 N 0.875
ONIVA04G19860 Oryza nivara ONIVA04G19860 N 0.875
ONIVA07G05400 Oryza nivara ONIVA07G05400 I 0.845
OPUNC01G27950 Oryza punctata OPUNC01G27950 I 0.845
OPUNC04G19030 Oryza punctata OPUNC04G19030 N 0.875
OPUNC04G19040 Oryza punctata OPUNC04G19040 N 0.875
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N 0.875
ORUFI01G31210 Oryza rufipogon ORUFI01G31210 I 0.845
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N 0.875
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N 0.875
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N 0.875
OS01G0705700 Oryza sativa OS01G0705700 I 0.845
OS04G0557200 Oryza sativa OS04G0557200 N 0.875
OS04G0557800 Oryza sativa OS04G0557800 N 0.862
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N 0.875
Pavir.Gb01093 Panicum virgatum Pavir.Gb01093 N 0.838
Pavir.J12952 Panicum virgatum Pavir.J12952 I 0.845
Pavir.J34298 Panicum virgatum Pavir.J34298 N 0.838
Pavir.J39604 Panicum virgatum Pavir.J39604 I 0.845
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I 0.875
estExt_fgenesh1_pg.C_310143 Physcomitrella patens estExt_fgenesh1_pg.C_310143 I 0.845
estExt_fgenesh1_pg.C_420092 Physcomitrella patens estExt_fgenesh1_pg.C_420092 I 0.845
POPTR_0002s05510 Populus trichocarpa POPTR_0002s05510 I 0.842
POPTR_0005s23020 Populus trichocarpa POPTR_0005s23020 I 0.842
Pm002304 Prunus mume Pm002304 I 0.842
Pm020164 Prunus mume Pm020164 I 0.842
Pm023805 Prunus mume Pm023805 I 0.838
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.838
PRUPE_ppa002884m2g Prunus persica PRUPE_ppa002884m2g I 0.842
PRUPE_ppa007561mg Prunus persica PRUPE_ppa007561mg I 0.842
29647.m002101 Ricinus communis 29647.m002101 I 0.842
SapurV1A.0076s0350 Salix purpurea SapurV1A.0076s0350 I 0.842
SapurV1A.0289s0260 Salix purpurea SapurV1A.0289s0260 I 0.842
Si000845m.g Setaria italica Si000845m.g I 0.851
Si004795m.g Setaria italica Si004795m.g I 0.845
Si012401m.g Setaria italica Si012401m.g I 0.851
Si029106m.g Setaria italica Si029106m.g I 0.842
Solyc09g065100.1 Solanum lycopersicum Solyc09g065100.1 I 0.842
PGSC0003DMG400012891 Solanum tuberosum PGSC0003DMG400012891 I 0.842
Sb02g006390 Sorghum bicolor Sb02g006390 I 0.842
Sb03g032420 Sorghum bicolor Sb03g032420 I 0.845
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.851
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.851
TCM_004403 Theobroma cacao TCM_004403 I 0.842
TCM_037645 Theobroma cacao TCM_037645 I 0.839
Traes_1AS_4DA31F550 Triticum aestivum Traes_1AS_4DA31F550 I 0.842
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N 0.875
TRAES3BF036800040CFD_g Triticum aestivum TRAES3BF036800040CFD_g I 0.845
TRAES3BF058400020CFD_g Triticum aestivum TRAES3BF058400020CFD_g I 0.845
Traes_4AL_F3571097B Triticum aestivum Traes_4AL_F3571097B I 0.842
Traes_4BS_34AF89ACE Triticum aestivum Traes_4BS_34AF89ACE I 0.842
Traes_4DS_7F3D9E4D9 Triticum aestivum Traes_4DS_7F3D9E4D9 I 0.842
TRIUR3_18279 Triticum urartu TRIUR3_18279 N 0.875
TRIUR3_26157 Triticum urartu TRIUR3_26157 N 0.875
TRIUR3_26880 Triticum urartu TRIUR3_26880 I 0.842
TRIUR3_35186 Triticum urartu TRIUR3_35186 N 0.875
TT8 Vitis vinifera VIT_07s0104g00090 I 0.842
GRMZM2G159937 Zea mays GRMZM2G159937 I 0.845
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.851