CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AT4G25400
(
Arabidopsis thaliana
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AT4G25400
T030676_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT4G25400
M09786_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT4G25400_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G25400.1
bHLH
2
54
EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQ
AT4G25400.2
bHLH
25
77
EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQ
Links
Other
bHLH
family TFs
Other
Arabidopsis thaliana
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000012426
Ailuropoda melanoleuca
ENSAMEG00000012426
I
ZNF662
Canis familiaris
ENSCAFG00000005374
I
ENSCSAG00000016725
Chlorocebus sabaeus
ENSCSAG00000016725
I
ZNF662
Equus caballus
ENSECAG00000010708
I
ZNF662
Homo sapiens
ENSG00000182983
D
ENSMMUP00000008532
Macaca fascicularis
ENSMMUP00000008532
I
ZNF662
Macaca mulatta
ENSMMUG00000006473
I
ZNF662
Microcebus murinus
ENSMICG00000009082
I
ENSMPUG00000011886
Mustela putorius furo
ENSMPUG00000011886
I
ENSNLEG00000005878
Nomascus leucogenys
ENSNLEG00000005878
I
ZNF662
Pan troglodytes
ENSPTRG00000040195
I
ENSPANG00000020683
Papio anubis
ENSPANG00000020683
I
ENSPPYG00000013971
Pongo abelii
ENSPPYG00000013971
I
ZNF662
Pteropus vampyrus
ENSPVAG00000002480
I
ZNF662
Tupaia belangeri
ENSTBEG00000014320
I