BGIOSGA022375 (Oryza indica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 BGIOSGA022375 T030934_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.886 0.520
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.886 0.520
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.886 0.520
SPT
M01709_2.00 		Arabidopsis thaliana
NCACGTGSN
NSCACGTGN		 PBM
Weirauch et al.(2014)
pTH8111 		0.879 0.980
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.866 0.540
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.866 0.540
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.866 0.540
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.866 0.540
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.864 0.720
e_gw1.209.40.1
M01756_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8070 		0.849 0.620
LRL2
M06738_2.00 		Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH69_col_a 		0.849 0.560
PK05451.1
M01120_2.00 		Cannabis sativa
YCACGTGM
KCACGTGR		 PBM
Lambert et al.(2019)
pTH10100 		0.842 0.840
PIF3
M00854_2.00 		Arabidopsis thaliana
CACGTGSNN
NNSCACGTG		 PBM
Franco-Zorrilla et al.(2014)
PIF3 		0.842 0.820
PIF3
M00722_2.00 		Arabidopsis thaliana
NCACRTN
NAYGTGN		 PBM
Chang et al.(2013)
pTH8200 		0.842 0.820
PIF3
M08045_2.00 		Arabidopsis thaliana
HCACGTGGVH
DBCCACGTGD		 ChIP-seq
Mathelier et al.(2014)
MA0560.1 		0.842 0.820
PIF3
M09780_2.00 		Arabidopsis thaliana
BDRRRVCACGTGRVSHCD
HGDSBYCACGTGBYYYHV		 Transfac
Matys et al.(2006)
P$PIF3_01 		0.842 0.820
PIF3
M09781_2.00 		Arabidopsis thaliana
DDDVCCACGTGGVMVNB
VNBKBCCACGTGGBHHH		 Transfac
Matys et al.(2006)
P$PIF3_02 		0.842 0.820
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA022375-PA bHLH 104 153

Links

Other bHLH family TFs
Other Oryza indica TFs

502 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_42727 Amanita muscaria M378DRAFT_42727 N 0.000
BOTBODRAFT_76690 Botryobasidium botryosum BOTBODRAFT_76690 N 0.000
BOTBODRAFT_73079 Botryobasidium botryosum BOTBODRAFT_73079 N 0.000
DACRYDRAFT_52998 Dacryopinax sp DACRYDRAFT_52998 N 0.000
DICSQDRAFT_31039 Dichomitus squalens DICSQDRAFT_31039 N 0.000
FOMPIDRAFT_1091714 Fomitopsis pinicola FOMPIDRAFT_1091714 N 0.000
GYMLUDRAFT_107672 Gymnopus luxurians GYMLUDRAFT_107672 N 0.000
M413DRAFT_71958 Hebeloma cylindrosporum M413DRAFT_71958 N 0.000
HETIRDRAFT_248182 Heterobasidion irregulare HETIRDRAFT_248182 N 0.000
HYDPIDRAFT_46608 Hydnomerulius pinastri HYDPIDRAFT_46608 N 0.000
JAAARDRAFT_132180 Jaapia argillacea JAAARDRAFT_132180 N 0.000
MPER_04209 Moniliophthora perniciosa MPER_04209 N 0.000
fgenesh1_pg.C_scaffold_5000337 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_5000337 N 0.000
PILCRDRAFT_57008 Piloderma croceum PILCRDRAFT_57008 N 0.000
PILCRDRAFT_82466 Piloderma croceum PILCRDRAFT_82466 N 0.000
PISMIDRAFT_80466 Pisolithus microcarpus PISMIDRAFT_80466 N 0.000
M404DRAFT_88423 Pisolithus tinctorius M404DRAFT_88423 N 0.000
SERLA73DRAFT_50420 Serpula lacrymans SERLA73DRAFT_50420 N 0.000
CY34DRAFT_51775 Suillus luteus CY34DRAFT_51775 N 0.000