CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TCFL5
(
Anolis carolinensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSACAG00000005435
T032697_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcfl5
M01744_2.00
Mus musculus
NBCDCGHGVN
NBCDCGHGVN
PBM
Weirauch et al.(2014)
pTH4576
0.902
0.941
TCFL5
M04074_2.00
Homo sapiens
KCRCGCGCHC
GDGCGCGYGM
SELEX
Yin et al.(2017)
TCFL5_eDBD_HT-SELEX
0.902
0.941
TCFL5
M04075_2.00
Homo sapiens
BCRCGCGCMC
GKGCGCGYGV
SELEX
Yin et al.(2017)
TCFL5_eDBD_Methyl-HT-SELEX
0.902
0.941
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000005317
bHLH
408
458
RRERHNRMERDRRRRIRICCDELNLLVPFCTSDTDKATTLQWTTAFLKYIQ
Links
Other
bHLH
family TFs
Other
Anolis carolinensis
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ia03252
Panicum virgatum
Pavir.Ia03252
N
Si039632m.g
Setaria italica
Si039632m.g
N
Si040200m.g
Setaria italica
Si040200m.g
N
Sb01g033153
Sorghum bicolor
Sb01g033153
N
Sb01g033165
Sorghum bicolor
Sb01g033165
N
GRMZM2G077495
Zea mays
GRMZM2G077495
N