TFEB (Cavia porcellus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCPOG00000008027 T033415_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfeb
M01728_2.00 		Mus musculus
CWCGTGAY
RTCACGWG		 PBM
Weirauch et al.(2014)
pTH5072 		0.914 1.000
TFEB
M02781_2.00 		Homo sapiens
RNCACGTGAY
RTCACGTGNY		 SELEX
Jolma et al.(2013)
TFEB_1 		0.914 1.000
TFEB
M02727_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Jolma et al.(2010)
TFEB_dimer 		0.914 1.000
TFEB
M04088_2.00 		Homo sapiens
YVCACGTGAYN
NRTCACGTGBR		 SELEX
Yin et al.(2017)
TFEB_eDBD_HT-SELEX 		0.914 1.000
TFEB
M08718_2.00 		Homo sapiens
CACGTGAYY
RRTCACGTG		 Misc
Kulakovskiy et al.(2013)
TFEB_HUMAN.H11MO.0.C 		0.914 1.000
Tfeb
M08753_2.00 		Mus musculus
CACGTGAYY
RRTCACGTG		 Misc
Kulakovskiy et al.(2013)
TFEB_MOUSE.H11MO.0.C 		0.914 1.000
TFEB
M04089_2.00 		Homo sapiens
VNCATGTGAYN
NRTCACATGNB		 SELEX
Yin et al.(2017)
TFEB_eDBD_Methyl-HT-SELEX 		0.914 1.000
Mitf
M01741_2.00 		Mus musculus
NCDCGTGAYN
NRTCACGHGN		 PBM
Weirauch et al.(2014)
pTH5465 		0.855 0.889
MITF
M08058_2.00 		Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN		 ChIP-seq
Mathelier et al.(2014)
MA0620.2 		0.855 0.889
MITF
M08740_2.00 		Homo sapiens
YCAYGTGACH
DGTCACRTGR		 Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A 		0.855 0.889
Mitf
M08765_2.00 		Mus musculus
BCHYGTGACY
RGTCACRDGV		 Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A 		0.855 0.889
Mitf
M09475_2.00 		Mus musculus
GTCACRWGVB
VBCWYGTGAC		 Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085 		0.855 0.889
MITF
M09880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q4 		0.855 0.889
MITF
M09881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MITF_Q6 		0.855 0.889
Tfe3
M01715_2.00 		Mus musculus
NCDCRTGAYN
NRTCAYGHGN		 PBM
Weirauch et al.(2014)
pTH5057 		0.855 0.870
Tfe3
M05833_2.00 		Mus musculus
CACGTGAY
RTCACGTG		 SMiLE-seq
Isakova et al.(2017)
TFE3 		0.855 0.870
Tfe3
M08743_2.00 		Mus musculus
TCACGTGACH
DGTCACGTGA		 Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A 		0.855 0.870
Tfe3
M09884_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFEA_01 		0.855 0.870
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000007224 bHLH 235 288

Links

Other bHLH family TFs
Other Cavia porcellus TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.00710.51.1 Aspergillus carbonarius e_gw1.00710.51.1 I 0.000
CADAFLAG00000370 Aspergillus flavus CADAFLAG00000370 I 0.000
ANIA_06846 Aspergillus nidulans CADANIAG00007644 D 0.000
M438DRAFT_344531 Aureobasidium pullulans M438DRAFT_344531 I 0.000
AUEXF2481DRAFT_456199 Aureobasidium subglaciale AUEXF2481DRAFT_456199 I 0.000
COCC4DRAFT_19355 Bipolaris maydis COCC4DRAFT_19355 I 0.000
COCMIDRAFT_24418 Bipolaris oryzae COCMIDRAFT_24418 I 0.000
COCSADRAFT_306311 Bipolaris sorokiniana COCSADRAFT_306311 I 0.000
COCVIDRAFT_12188 Bipolaris victoriae COCVIDRAFT_12188 I 0.000
COCCADRAFT_32122 Bipolaris zeicola COCCADRAFT_32122 I 0.000
BDDG_02031 Blastomyces dermatitidis BDDG_02031 I 0.000
CaO19.8761 Candida albicans CaO19.8761 I 0.000
CaO19.1168 Candida albicans CaO19.1168 I 0.000
CD36_10810 Candida dubliniensis CD36_10810 I 0.000
G210_5732 Candida maltosa G210_5732 I 0.000
CERSUDRAFT_114532 Ceriporiopsis subvermispora CERSUDRAFT_114532 I 0.000
Z519_04194 Cladophialophora bantiana Z519_04194 I 0.000
G647_00858 Cladophialophora carrionii G647_00858 I 0.000
estExt_fgenesh1_pg.C_40169 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40169 I 0.000
CFIO01_07975 Colletotrichum fioriniae CFIO01_07975 I 0.000
CGGC5_14706 Colletotrichum gloeosporioides CGGC5_14706 I 0.000
GLRG_00281 Colletotrichum graminicola GLRG_00281 I 0.000
GLRG_05504 Colletotrichum graminicola GLRG_05504 I 0.000
CH063_11393 Colletotrichum higginsianum CH063_11393 I 0.000
CSUB01_12509 Colletotrichum sublineola CSUB01_12509 I 0.000
W97_02535 Coniosporium apollinis W97_02535 I 0.000
HMPREF1541_10534 Cyphellophora europaea HMPREF1541_10534 I 0.000
FFUJ_00121 Fusarium fujikuroi FFUJ_00121 I 0.000
NechaG103320 Fusarium solani NechaG103320 I 0.000
NechaG46033 Fusarium solani NechaG46033 I 0.000
LEMA_P120870.1 Leptosphaeria maculans LEMA_P120870.1 I 0.000
MBM_00253 Marssonina brunnea MBM_00253 I 0.000
X797_011064 Metarhizium robertsii X797_011064 I 0.000
e_gw1.17.466.1 Nectria haematococca e_gw1.17.466.1 I 0.000
estExt_fgenesh1_pm.C_sca_18_chr2_1_00122 Nectria haematococca estExt_fgenesh1_pm.C_sca_18_chr2_1_00122 I 0.000
NCU00017 Neurospora crassa NCU00017 D 0.000
estExt_fgenesh3_pm.C_50537 Neurospora discreta estExt_fgenesh3_pm.C_50537 I 0.000
PTT_16310 Pyrenophora teres PTT_16310 I 0.000
PTRG_07169 Pyrenophora triticirepentis PTRG_07169 I 0.000
SNOG_00909 Stagonospora nodorum SNOG_00909 I 0.000
VDBG_02399 Verticillium albo atrum VDBG_02399 I 0.000
VDBG_02399 Verticillium alfalfae VDBG_02399 I 0.000