CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYCN
(
Dasypus novemcinctus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSDNOG00000047342
T033839_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mycn
M08768_2.00
Mus musculus
MCACGYGV
BCRCGTGK
Misc
Kulakovskiy et al.(2013)
MYCN_MOUSE.H11MO.0.A
0.902
0.962
Mycn
M09476_2.00
Mus musculus
SCACGTGSNN
NNSCACGTGS
Misc
Heinz et al.(2010)
mES-nMyc_GSE11431
0.902
0.962
MYCN
M04128_2.00
Homo sapiens
NVCACGTGNN
NNCACGTGBN
SELEX
Yin et al.(2017)
MYCN_eDBD_HT-SELEX
0.902
0.943
MYCN
M08053_2.00
Homo sapiens
NNCCACGTGGNN
NNCCACGTGGNN
ChIP-seq
Mathelier et al.(2014)
MA0104.4
0.902
0.943
MYCN
M08727_2.00
Homo sapiens
BHSCACGTGBYB
VRVCACGTGSDV
Misc
Kulakovskiy et al.(2013)
MYCN_HUMAN.H11MO.0.A
0.902
0.943
MYCN
M09846_2.00
Homo sapiens
NNVCACGTGNHN
NDNCACGTGBNN
Transfac
Matys et al.(2006)
V$NMYC_01
0.902
0.943
MYCN
M09847_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NMYC_02
0.902
0.943
MYCN
M09848_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NMYC_Q3
0.902
0.943
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000034324
bHLH
376
428
RRRNHNILERQRRNDLRSSFLTLRDHVPELVKNERAAKVVILKKATEYVRALQ
Links
Other
bHLH
family TFs
Other
Dasypus novemcinctus
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_34.221
Carica papaya
evm.TU.supercontig_34.221
N
Ca_10228
Cicer arietinum
Ca_10228
N
Cla011265
Citrullus lanatus
Cla011265
N
Ciclev10016383m.g
Citrus clementina
Ciclev10016383m.g
N
orange1.1g025739m.g
Citrus sinensis
orange1.1g025739m.g
N
Cucsa.142580
Cucumis sativus
Cucsa.142580
N
Eucgr.J00637
Eucalyptus grandis
Eucgr.J00637
N
GLYMA20G10600
Glycine max
GLYMA20G10600
N
GLYMA13G03880
Glycine max
GLYMA13G03880
N
Gorai.013G266400
Gossypium raimondii
Gorai.013G266400
N
MTR_5g088230
Medicago truncatula
MTR_5g088230
N
mgf016309m
Mimulus guttatus
mgf016309m
N
POPTR_0001s22790
Populus trichocarpa
POPTR_0001s22790
N
POPTR_0009s02360
Populus trichocarpa
POPTR_0009s02360
N
Pm001671
Prunus mume
Pm001671
N
30089.m001012
Ricinus communis
30089.m001012
N
SapurV1A.0977s0060
Salix purpurea
SapurV1A.0977s0060
N
SapurV1A.1066s0010
Salix purpurea
SapurV1A.1066s0010
N
SapurV1A.1951s0040
Salix purpurea
SapurV1A.1951s0040
N
SapurV1A.3860s0010
Salix purpurea
SapurV1A.3860s0010
N
Solyc01g008980.2
Solanum lycopersicum
Solyc01g008980.2
N
PGSC0003DMG400022706
Solanum tuberosum
PGSC0003DMG400022706
N
TCM_042034
Theobroma cacao
TCM_042034
N
VIT_06s0009g01790
Vitis vinifera
VIT_06s0009g01790
N