ENSLACG00000002803 (Latimeria chalumnae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLACG00000002803 T034792_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AHR
M08716_2.00 		Homo sapiens
DCACGCNMH
DKNGCGTGH		 Misc
Kulakovskiy et al.(2013)
AHR_HUMAN.H11MO.0.B 		0.914 0.957
Ahr
M08747_2.00 		Mus musculus
DCACGCNMH
DKNGCGTGH		 Misc
Kulakovskiy et al.(2013)
AHR_MOUSE.H11MO.0.B 		0.914 0.957
AHR
M09816_2.00 		Homo sapiens
WSTCACGCDASYYBGRRS
SYYCVRRSTHGCGTGASW		 Transfac
Matys et al.(2006)
V$AHR_01 		0.914 0.957
AHR
M09817_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AHR_Q5 		0.914 0.957
AHR
M09818_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AHR_Q6_01 		0.914 0.957
AHR
M09819_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AHR_Q6 		0.914 0.957
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000003128 bHLH 32 77
ENSLACP00000003129 bHLH 27 73
ENSLACP00000003130 bHLH 17 63

Links

Other bHLH family TFs
Other Latimeria chalumnae TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_24638 Aegilops tauschii F775_24638 I 0.000
AMTR_s00024p00053860 Amborella trichopoda AMTR_s00024p00053860 I 0.000
AMTR_s00059p00206130 Amborella trichopoda AMTR_s00059p00206130 I 0.000
Aquca_005_00557 Aquilegia coerulea Aquca_005_00557 I 0.000
Aquca_010_00347 Aquilegia coerulea Aquca_010_00347 I 0.000
KAN2 Arabidopsis lyrata fgenesh2_kg.1__3368__AT1G32240.1 I 0.000
KAN3 Arabidopsis lyrata fgenesh2_kg.7__2541__AT4G17695.1 I 0.000
KAN4 Arabidopsis lyrata fgenesh2_kg.8__589__AT5G42630.1 I 0.000
KAN2 Arabidopsis thaliana AT1G32240 D 0.000
KAN3 Arabidopsis thaliana AT4G17695 I 0.000
KAN1 Arabidopsis thaliana AT5G16560 D 0.000
KAN4 Arabidopsis thaliana AT5G42630 D 0.000
Bostr.30275s0232 Boechera stricta Bostr.30275s0232 I 0.000
Bostr.3148s0235 Boechera stricta Bostr.3148s0235 I 0.000
Bostr.3359s0130 Boechera stricta Bostr.3359s0130 I 0.000
BRADI1G07510 Brachypodium distachyon BRADI1G07510 I 0.000
BRADI1G14480 Brachypodium distachyon BRADI1G14480 I 0.000
BRADI3G00550 Brachypodium distachyon BRADI3G00550 I 0.000
BRADI3G36260 Brachypodium distachyon BRADI3G36260 I 0.000
BRADI3G52320 Brachypodium distachyon BRADI3G52320 I 0.000
BRADI4G29700 Brachypodium distachyon BRADI4G29700 I 0.000
Bo00774s020 Brassica oleracea Bo00774s020 I 0.000
Bo1g017770 Brassica oleracea Bo1g017770 I 0.000
Bo2g013140 Brassica oleracea Bo2g013140 I 0.000
Bo2g115180 Brassica oleracea Bo2g115180 I 0.000
Bo3g012110 Brassica oleracea Bo3g012110 I 0.000
Bo5g048880 Brassica oleracea Bo5g048880 I 0.000
Bo8g049650 Brassica oleracea Bo8g049650 I 0.000
Bo9g163080 Brassica oleracea Bo9g163080 I 0.000
Bra008613 Brassica rapa Bra008613 I 0.000
Bra021038 Brassica rapa Bra021038 I 0.000
Bra023254 Brassica rapa Bra023254 I 0.000
Bra023570 Brassica rapa Bra023570 I 0.000
Bra033844 Brassica rapa Bra033844 I 0.000
Bra035311 Brassica rapa Bra035311 I 0.000
Bra040176 Brassica rapa Bra040176 I 0.000
PK09499.1 Cannabis sativa PK09499.1 I 0.000
PK19727.1 Cannabis sativa PK19727.1 I 0.000
PK20264.1 Cannabis sativa PK20264.1 I 0.000
Cagra.0873s0003 Capsella grandiflora Cagra.0873s0003 I 0.000
Cagra.3356s0061 Capsella grandiflora Cagra.3356s0061 I 0.000
Cagra.3957s0006 Capsella grandiflora Cagra.3957s0006 I 0.000
Carubv10005261m.g Capsella rubella Carubv10005261m.g I 0.000
Carubv10009328m.g Capsella rubella Carubv10009328m.g I 0.000
Carubv10026920m.g Capsella rubella Carubv10026920m.g I 0.000
evm.TU.supercontig_208.13 Carica papaya evm.TU.supercontig_208.13 I 0.000
evm.TU.supercontig_3.342 Carica papaya evm.TU.supercontig_3.342 I 0.000
evm.TU.supercontig_64.19 Carica papaya evm.TU.supercontig_64.19 I 0.000
Ca_10854 Cicer arietinum Ca_10854 I 0.000
Ca_11473 Cicer arietinum Ca_11473 I 0.000
Cla008982 Citrullus lanatus Cla008982 I 0.000
Cla021027 Citrullus lanatus Cla021027 I 0.000
Cla022877 Citrullus lanatus Cla022877 I 0.000
Ciclev10001292m.g Citrus clementina Ciclev10001292m.g I 0.000
Ciclev10001679m.g Citrus clementina Ciclev10001679m.g I 0.000
orange1.1g014753m.g Citrus sinensis orange1.1g014753m.g I 0.000
orange1.1g018802m.g Citrus sinensis orange1.1g018802m.g I 0.000
Cucsa.232510 Cucumis sativus Cucsa.232510 I 0.000
Cucsa.322050 Cucumis sativus Cucsa.322050 I 0.000
Cucsa.341860 Cucumis sativus Cucsa.341860 I 0.000
Eucgr.D02225 Eucalyptus grandis Eucgr.D02225 I 0.000
Eucgr.E00234 Eucalyptus grandis Eucgr.E00234 I 0.000
Eucgr.E00246 Eucalyptus grandis Eucgr.E00246 I 0.000
Thhalv10003256m.g Eutrema salsugineum Thhalv10003256m.g I 0.000
Thhalv10007844m.g Eutrema salsugineum Thhalv10007844m.g I 0.000
Thhalv10026166m.g Eutrema salsugineum Thhalv10026166m.g I 0.000
gene15055-v1.0-hybrid Fragaria vesca gene15055-v1.0-hybrid I 0.000
GLYMA01G01875 Glycine max GLYMA01G01875 I 0.000
GLYMA02G40930 Glycine max GLYMA02G40930 I 0.000
GLYMA04G03801 Glycine max GLYMA04G03801 I 0.000
GLYMA06G03901 Glycine max GLYMA06G03901 I 0.000
GLYMA09G34030 Glycine max GLYMA09G34030 I 0.000
GLYMA11G33356 Glycine max GLYMA11G33356 I 0.000
GLYMA14G08620 Glycine max GLYMA14G08620 I 0.000
GLYMA14G39260 Glycine max GLYMA14G39260 I 0.000
GLYMA17G36500 Glycine max GLYMA17G36500 I 0.000
GLYMA18G04880 Glycine max GLYMA18G04880 I 0.000
Gorai.004G182500 Gossypium raimondii Gorai.004G182500 I 0.000
Gorai.005G105600 Gossypium raimondii Gorai.005G105600 I 0.000
Gorai.008G224400 Gossypium raimondii Gorai.008G224400 I 0.000
Gorai.009G207200 Gossypium raimondii Gorai.009G207200 I 0.000
Gorai.010G015500 Gossypium raimondii Gorai.010G015500 I 0.000
MLOC_10064 Hordeum vulgare MLOC_10064 I 0.000
MLOC_138 Hordeum vulgare MLOC_138 I 0.000
MLOC_53943 Hordeum vulgare MLOC_53943 I 0.000
MLOC_58335 Hordeum vulgare MLOC_58335 I 0.000
MLOC_79754 Hordeum vulgare MLOC_79754 I 0.000
LPERR02G23480 Leersia perrieri LPERR02G23480 I 0.000
LPERR03G21860 Leersia perrieri LPERR03G21860 I 0.000
LPERR03G29730 Leersia perrieri LPERR03G29730 I 0.000
LPERR06G00630 Leersia perrieri LPERR06G00630 I 0.000
LPERR08G03610 Leersia perrieri LPERR08G03610 I 0.000
LPERR08G12560 Leersia perrieri LPERR08G12560 I 0.000
LPERR09G06370 Leersia perrieri LPERR09G06370 I 0.000
Lus10011660.g Linum usitatissimum Lus10011660.g I 0.000
Lus10030989.g Linum usitatissimum Lus10030989.g I 0.000
Lus10032746.g Linum usitatissimum Lus10032746.g I 0.000
Lus10035387.g Linum usitatissimum Lus10035387.g I 0.000
chr1.LjT39K06.80.nd Lotus japonicus chr1.LjT39K06.80.nd I 0.000
chr5.CM0089.670.nd Lotus japonicus chr5.CM0089.670.nd I 0.000
MDP0000145790 Malus domestica MDP0000145790 I 0.000
MDP0000187812 Malus domestica MDP0000187812 I 0.000
MDP0000221436 Malus domestica MDP0000221436 I 0.000
MDP0000253782 Malus domestica MDP0000253782 I 0.000
MDP0000263292 Malus domestica MDP0000263292 I 0.000
cassava12953.valid.m1 Manihot esculenta cassava12953.valid.m1 I 0.000
cassava22528.valid.m1 Manihot esculenta cassava22528.valid.m1 I 0.000
cassava28777.m1 Manihot esculenta cassava28777.m1 I 0.000
MTR_1g021520 Medicago truncatula MTR_1g021520 I 0.000
MTR_3g064840 Medicago truncatula MTR_3g064840 I 0.000
MTR_5g029470 Medicago truncatula MTR_5g029470 I 0.000
mgf026535m Mimulus guttatus mgf026535m I 0.000
GSMUA_Achr10G06430_001 Musa acuminata GSMUA_Achr10G06430_001 I 0.000
GSMUA_Achr10G28630_001 Musa acuminata GSMUA_Achr10G28630_001 I 0.000
GSMUA_Achr11G17900_001 Musa acuminata GSMUA_Achr11G17900_001 I 0.000
GSMUA_Achr1G06280_001 Musa acuminata GSMUA_Achr1G06280_001 I 0.000
GSMUA_Achr1G22100_001 Musa acuminata GSMUA_Achr1G22100_001 I 0.000
GSMUA_Achr1G23970_001 Musa acuminata GSMUA_Achr1G23970_001 I 0.000
GSMUA_Achr2G06700_001 Musa acuminata GSMUA_Achr2G06700_001 I 0.000
GSMUA_Achr2G13320_001 Musa acuminata GSMUA_Achr2G13320_001 I 0.000
GSMUA_Achr2G18070_001 Musa acuminata GSMUA_Achr2G18070_001 I 0.000
GSMUA_Achr3G00380_001 Musa acuminata GSMUA_Achr3G00380_001 I 0.000
GSMUA_Achr4G04510_001 Musa acuminata GSMUA_Achr4G04510_001 I 0.000
GSMUA_Achr4G23160_001 Musa acuminata GSMUA_Achr4G23160_001 I 0.000
GSMUA_Achr4G32400_001 Musa acuminata GSMUA_Achr4G32400_001 I 0.000
GSMUA_Achr7G00680_001 Musa acuminata GSMUA_Achr7G00680_001 I 0.000
GSMUA_Achr7G02420_001 Musa acuminata GSMUA_Achr7G02420_001 I 0.000
GSMUA_Achr8G22900_001 Musa acuminata GSMUA_Achr8G22900_001 I 0.000
GSMUA_AchrUn_randomG02870_001 Musa acuminata GSMUA_AchrUn_randomG02870_001 I 0.000
GSMUA_AchrUn_randomG07870_001 Musa acuminata GSMUA_AchrUn_randomG07870_001 I 0.000
GSMUA_AchrUn_randomG10390_001 Musa acuminata GSMUA_AchrUn_randomG10390_001 I 0.000
GSMUA_AchrUn_randomG15160_001 Musa acuminata GSMUA_AchrUn_randomG15160_001 I 0.000
OBART03G35350 Oryza barthii OBART03G35350 I 0.000
OBART08G15270 Oryza barthii OBART08G15270 I 0.000
OBART09G09230 Oryza barthii OBART09G09230 I 0.000
OB02G36030 Oryza brachyantha OB02G36030 I 0.000
OB03G34420 Oryza brachyantha OB03G34420 I 0.000
OB03G42360 Oryza brachyantha OB03G42360 I 0.000
OB06G10790 Oryza brachyantha OB06G10790 I 0.000
OB09G16020 Oryza brachyantha OB09G16020 I 0.000
OB12G24300 Oryza brachyantha OB12G24300 I 0.000
ORGLA03G0324100 Oryza glaberrima ORGLA03G0324100 I 0.000
ORGLA08G0030700 Oryza glaberrima ORGLA08G0030700 I 0.000
ORGLA08G0133500 Oryza glaberrima ORGLA08G0133500 I 0.000
ORGLA09G0068300 Oryza glaberrima ORGLA09G0068300 I 0.000
OGLUM02G29460 Oryza glumaepatula OGLUM02G29460 I 0.000
OGLUM03G35130 Oryza glumaepatula OGLUM03G35130 I 0.000
OGLUM08G16000 Oryza glumaepatula OGLUM08G16000 I 0.000
OGLUM09G09500 Oryza glumaepatula OGLUM09G09500 I 0.000
BGIOSGA013627 Oryza indica BGIOSGA013627 I 0.000
BGIOSGA022077 Oryza indica BGIOSGA022077 I 0.000
BGIOSGA028027 Oryza indica BGIOSGA028027 I 0.000
BGIOSGA028704 Oryza indica BGIOSGA028704 I 0.000
OLONG_003708 Oryza longistaminata OLONG_003708 I 0.000
OMERI02G27920 Oryza meridionalis OMERI02G27920 I 0.000
OMERI03G32640 Oryza meridionalis OMERI03G32640 I 0.000
OMERI06G00680 Oryza meridionalis OMERI06G00680 I 0.000
OMERI08G03690 Oryza meridionalis OMERI08G03690 I 0.000
OMERI09G07260 Oryza meridionalis OMERI09G07260 I 0.000
ONIVA02G31640 Oryza nivara ONIVA02G31640 I 0.000
ONIVA03G36870 Oryza nivara ONIVA03G36870 I 0.000
ONIVA06G00780 Oryza nivara ONIVA06G00780 I 0.000
ONIVA08G03630 Oryza nivara ONIVA08G03630 I 0.000
ONIVA08G16390 Oryza nivara ONIVA08G16390 I 0.000
ONIVA09G08220 Oryza nivara ONIVA09G08220 I 0.000
OPUNC03G32390 Oryza punctata OPUNC03G32390 I 0.000
OPUNC06G00630 Oryza punctata OPUNC06G00630 I 0.000
OPUNC08G12870 Oryza punctata OPUNC08G12870 I 0.000
OPUNC09G07830 Oryza punctata OPUNC09G07830 I 0.000
ORUFI02G30450 Oryza rufipogon ORUFI02G30450 I 0.000
ORUFI03G36810 Oryza rufipogon ORUFI03G36810 I 0.000
ORUFI06G00780 Oryza rufipogon ORUFI06G00780 I 0.000
ORUFI09G09960 Oryza rufipogon ORUFI09G09960 I 0.000
OS02G0696900 Oryza sativa OS02G0696900 I 0.000
OS03G0624000 Oryza sativa OS03G0624000 I 0.000
OS03G0766500 Oryza sativa OS03G0766500 I 0.000
OS08G0160300 Oryza sativa OS08G0160300 I 0.000
OS08G0426866 Oryza sativa OS08G0426866 I 0.000
OS09G0395300 Oryza sativa OS09G0395300 I 0.000
Pavir.Aa01011 Panicum virgatum Pavir.Aa01011 I 0.000
Pavir.Ab02797 Panicum virgatum Pavir.Ab02797 I 0.000
Pavir.Ia00330 Panicum virgatum Pavir.Ia00330 I 0.000
Pavir.Ia01264 Panicum virgatum Pavir.Ia01264 I 0.000
Pavir.Ib04064 Panicum virgatum Pavir.Ib04064 I 0.000
Pavir.J09156 Panicum virgatum Pavir.J09156 I 0.000
Pavir.J21939 Panicum virgatum Pavir.J21939 I 0.000
Pavir.J38315 Panicum virgatum Pavir.J38315 I 0.000
estExt_fgenesh1_pg.C_1140095 Physcomitrella patens estExt_fgenesh1_pg.C_1140095 I 0.000
estExt_fgenesh1_pg.C_90140 Physcomitrella patens estExt_fgenesh1_pg.C_90140 I 0.000
POPTR_0001s02010 Populus trichocarpa POPTR_0001s02010 I 0.000
POPTR_0003s09490 Populus trichocarpa POPTR_0003s09490 I 0.000
POPTR_0004s08070 Populus trichocarpa POPTR_0004s08070 I 0.000
POPTR_0014s03650 Populus trichocarpa POPTR_0014s03650 I 0.000
Pm023154 Prunus mume Pm023154 I 0.000
PRUPE_ppa006472mg Prunus persica PRUPE_ppa006472mg I 0.000
PRUPE_ppa016187mg Prunus persica PRUPE_ppa016187mg I 0.000
PRUPE_ppa021685mg Prunus persica PRUPE_ppa021685mg I 0.000
30068.m002645 Ricinus communis 30068.m002645 I 0.000
30170.m013948 Ricinus communis 30170.m013948 I 0.000
SapurV1A.0017s0490 Salix purpurea SapurV1A.0017s0490 I 0.000
SapurV1A.0051s0120 Salix purpurea SapurV1A.0051s0120 I 0.000
SapurV1A.0063s0050 Salix purpurea SapurV1A.0063s0050 I 0.000
SapurV1A.0525s0030 Salix purpurea SapurV1A.0525s0030 I 0.000
SELMODRAFT_405704 Selaginella moellendorffii SELMODRAFT_405704 I 0.000
SELMODRAFT_415531 Selaginella moellendorffii SELMODRAFT_415531 I 0.000
SELMODRAFT_441930 Selaginella moellendorffii SELMODRAFT_441930 I 0.000
SELMODRAFT_447180 Selaginella moellendorffii SELMODRAFT_447180 I 0.000
SELMODRAFT_47302 Selaginella moellendorffii SELMODRAFT_47302 I 0.000
SELMODRAFT_47303 Selaginella moellendorffii SELMODRAFT_47303 I 0.000
Si024683m.g Setaria italica Si024683m.g I 0.000
Si036187m.g Setaria italica Si036187m.g I 0.000
Solyc04g079600.2 Solanum lycopersicum Solyc04g079600.2 I 0.000
Solyc05g051060.2 Solanum lycopersicum Solyc05g051060.2 I 0.000
Solyc08g076400.2 Solanum lycopersicum Solyc08g076400.2 I 0.000
PGSC0003DMG400006988 Solanum tuberosum PGSC0003DMG400006988 I 0.000
PGSC0003DMG400011688 Solanum tuberosum PGSC0003DMG400011688 I 0.000
PGSC0003DMG400013324 Solanum tuberosum PGSC0003DMG400013324 I 0.000
PGSC0003DMG400014803 Solanum tuberosum PGSC0003DMG400014803 I 0.000
PGSC0003DMG400016767 Solanum tuberosum PGSC0003DMG400016767 I 0.000
PGSC0003DMG400018472 Solanum tuberosum PGSC0003DMG400018472 I 0.000
Sb01g007030 Sorghum bicolor Sb01g007030 I 0.000
Sb01g014354 Sorghum bicolor Sb01g014354 I 0.000
Sb04g031030 Sorghum bicolor Sb04g031030 I 0.000
Sb08g019940 Sorghum bicolor Sb08g019940 I 0.000
TCM_016589 Theobroma cacao TCM_016589 I 0.000
TCM_033940 Theobroma cacao TCM_033940 I 0.000
Traes_4BL_8719DBF92 Triticum aestivum Traes_4BL_8719DBF92 I 0.000
Traes_4BS_481D51B66 Triticum aestivum Traes_4BS_481D51B66 I 0.000
Traes_4DS_808AD9543 Triticum aestivum Traes_4DS_808AD9543 I 0.000
Traes_5BS_82133897D Triticum aestivum Traes_5BS_82133897D I 0.000
Traes_5DL_EFE6EFEDF Triticum aestivum Traes_5DL_EFE6EFEDF I 0.000
Traes_5DS_19B90732F Triticum aestivum Traes_5DS_19B90732F I 0.000
Traes_5DS_39E5EF501 Triticum aestivum Traes_5DS_39E5EF501 I 0.000
Traes_6AL_B2256B77F Triticum aestivum Traes_6AL_B2256B77F I 0.000
Traes_6AS_4B9F0CBBF Triticum aestivum Traes_6AS_4B9F0CBBF I 0.000
Traes_6BS_2125E90F3 Triticum aestivum Traes_6BS_2125E90F3 I 0.000
Traes_6DL_DB1546316 Triticum aestivum Traes_6DL_DB1546316 I 0.000
Traes_6DS_C7C1FFE0C Triticum aestivum Traes_6DS_C7C1FFE0C I 0.000
TRIUR3_02469 Triticum urartu TRIUR3_02469 I 0.000
TRIUR3_34123 Triticum urartu TRIUR3_34123 I 0.000
KAN2 Vitis vinifera VIT_02s0012g01940 I 0.000
KAN3 Vitis vinifera VIT_16s0039g01900 I 0.000
VIT_18s0001g11390 Vitis vinifera VIT_18s0001g11390 I 0.000
GRMZM2G034563 Zea mays GRMZM2G034563 I 0.000
GRMZM2G039074 Zea mays GRMZM2G039074 I 0.000
GRMZM2G056400 Zea mays GRMZM2G056400 I 0.000
GRMZM2G060834 Zea mays GRMZM2G060834 I 0.000
GRMZM2G070865 Zea mays GRMZM2G070865 I 0.000
GRMZM2G082264 Zea mays GRMZM2G082264 I 0.000
GRMZM2G123308 Zea mays GRMZM2G123308 I 0.000
GRMZM2G175827 Zea mays GRMZM2G175827 I 0.000
GRMZM2G370425 Zea mays GRMZM2G370425 I 0.000
GRMZM6G039492 Zea mays GRMZM6G039492 I 0.000