BHLHE40 (Loxodonta africana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLAFG00000004896 T034903_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.914 1.000
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.914 1.000
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.914 1.000
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.914 1.000
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.914 1.000
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.914 1.000
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.914 1.000
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.914 1.000
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.914 1.000
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.914 1.000
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.914 1.000
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.914 1.000
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.914 1.000
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.914 1.000
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.914 1.000
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.914 0.981
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.914 0.981
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.914 0.981
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.914 0.981
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.914 0.981
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.914 0.981
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.914 0.981
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000004098 bHLH 54 108

Links

Other bHLH family TFs
Other Loxodonta africana TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CD36_81110 Candida dubliniensis CD36_81110 I
CAGL0M10505g Candida glabrata CAGL0M10505g I
G210_3517 Candida maltosa G210_3517 I
CORT_0B03230 Candida orthopsilosis CORT_0B03230 N
CPAG_00203 Candida parapsilosis CPAG_00203 N
CTRG_02198 Candida tropicalis CTRG_02198 N
DEHA2F18194g Debaryomyces hansenii DEHA2F18194g N
KAFR_0F02510 Kazachstania africana KAFR_0F02510 I
KNAG_0K01480 Kazachstania naganishii KNAG_0K01480 I
KLTH0G16566g Kluyveromyces thermotolerans KLTH0G16566g N
Kwal_11003 Kluyveromyces waltii Kwal_11003 N
KUCA_T00005075001 Kuraishia capsulata KUCA_T00005075001 N
SAKL0C11308g Lachancea kluyveri SAKL0C11308g N
LALA0_S09e06216g Lachancea lanzarotensis LALA0_S09e06216g I
KLTH0G16566g Lachancea thermotolerans KLTH0G16566g N
LELG_02079 Lodderomyces elongisporus LELG_02079 N
GNLVRS01_PISO0G08322g Millerozyma farinosa GNLVRS01_PISO0G08322g N
GNLVRS01_PISO0H08323g Millerozyma farinosa GNLVRS01_PISO0H08323g N
NCAS_0A10110 Naumovozyma castellii NCAS_0A10110 I
NDAI_0A07360 Naumovozyma dairenensis NDAI_0A07360 I
HPODL_00357 Ogataea parapolymorpha HPODL_00357 N
gwh1.8.1.855.1 Pichia stipitis gwh1.8.1.855.1 N
603_YDL002C Saccharomyces bayanus 603_YDL002C I
Scas_Contig482.3 Saccharomyces castellii Scas_Contig482.3 I
NHP10 Saccharomyces cerevisiae YDL002C D
SKUD_167206 Saccharomyces kudriavzevii SKUD_167206 I
3225_YDL002C Saccharomyces mikatae 3225_YDL002C I
3735_YDL002C Saccharomyces paradoxus 3735_YDL002C I
PICST_12709 Scheffersomyces stipitis PICST_12709 N
SPAPADRAFT_141112 Spathaspora passalidarum SPAPADRAFT_141112 N
TBLA_0A00160 Tetrapisispora blattae TBLA_0A00160 I
TPHA_0P00560 Tetrapisispora phaffii TPHA_0P00560 I
Kpol_1045p57 Vanderwaltozyma polyspora Kpol_1045p57 I
ZBAI_07968 Zygosaccharomyces bailii ZBAI_07968 I
ZBAI_02112 Zygosaccharomyces bailii ZBAI_02112 I
ZYRO0A04378g Zygosaccharomyces rouxii ZYRO0A04378g I