usf1 (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000005343 T037842_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
USF2
M04076_2.00 		Homo sapiens
NVCACGTGVCN
NGBCACGTGBN		 SELEX
Yin et al.(2017)
USF2_eDBD_HT-SELEX 		0.876 0.870
USF2
M08050_2.00 		Homo sapiens
NNVYCACGTGACHNNN
NNNDGTCACGTGRBNN		 ChIP-seq
Mathelier et al.(2014)
MA0526.2 		0.876 0.870
USF2
M07785_2.00 		Homo sapiens
NGTCACGTGRBSVVV
BBBSVYCACGTGACN		 ChIP-seq
Gerstein et al.(2012)
GM12878_USF2_Stanford 		0.876 0.870
USF2
M07786_2.00 		Homo sapiens
NVGTCACGTGRBSVVV
BBBSVYCACGTGACBN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_USF2_Stanford 		0.876 0.870
USF2
M07787_2.00 		Homo sapiens
RGTCACGTGVB
VBCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_USF2_Stanford 		0.876 0.870
USF2
M07788_2.00 		Homo sapiens
NGTCACGTGRBSV
BSVYCACGTGACN		 ChIP-seq
Gerstein et al.(2012)
HepG2_USF2_Stanford 		0.876 0.870
USF2
M07789_2.00 		Homo sapiens
RGTCACGTGRBSV
BSVYCACGTGACY		 ChIP-seq
Gerstein et al.(2012)
K562_USF2_Stanford 		0.876 0.870
USF2
M08715_2.00 		Homo sapiens
NVGTCACGTGVBSVNNVNB
VNBNNBSVBCACGTGACBN		 Misc
Kulakovskiy et al.(2013)
USF2_HUMAN.H11MO.0.A 		0.876 0.870
USF2
M09812_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_01 		0.876 0.870
USF2
M09813_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_02 		0.876 0.870
USF2
M09814_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_Q6_01 		0.876 0.870
USF2
M09815_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$USF2_Q6 		0.876 0.870
USF2
M04077_2.00 		Homo sapiens
VNCAYGTGACN
NGTCACRTGNB		 SELEX
Yin et al.(2017)
USF2_eDBD_Methyl-HT-SELEX 		0.876 0.870
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000012820 bHLH 199 257
ENSTRUP00000012821 bHLH 189 247
ENSTRUP00000012822 bHLH 61 119
ENSTRUP00000012823 bHLH 190 248

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB07605.1 Alternaria brassicicola AB07605.1 I
ACLA_045510 Aspergillus clavatus CADACLAG00004903 I
CADAFLAG00005111 Aspergillus flavus CADAFLAG00005111 I
CADAORAG00008049 Aspergillus oryzae CADAORAG00008049 I
EURHEDRAFT_379254 Aspergillus ruber EURHEDRAFT_379254 I
M437DRAFT_52991 Aureobasidium melanogenum M437DRAFT_52991 I
M438DRAFT_297102 Aureobasidium pullulans M438DRAFT_297102 I
AUEXF2481DRAFT_66369 Aureobasidium subglaciale AUEXF2481DRAFT_66369 I
BAUCODRAFT_144662 Baudoinia compniacensis BAUCODRAFT_144662 I
BBA_02802 Beauveria bassiana BBA_02802 I
COCC4DRAFT_160926 Bipolaris maydis COCC4DRAFT_160926 I
COCMIDRAFT_82613 Bipolaris oryzae COCMIDRAFT_82613 I
COCSADRAFT_96143 Bipolaris sorokiniana COCSADRAFT_96143 I
COCVIDRAFT_104407 Bipolaris victoriae COCVIDRAFT_104407 I
COCCADRAFT_85149 Bipolaris zeicola COCCADRAFT_85149 I
Bcin11g01030 Botrytis cinerea Bcin11g01030 I
PVAR5_4134 Byssochlamys spectabilis PVAR5_4134 I
A1O1_06449 Capronia coronata A1O1_06449 I
A1O3_05958 Capronia epimyces A1O3_05958 I
PV04_06889 Capronia semiimmersa PV04_06889 I
CTHT_0044790 Chaetomium thermophilum CTHT_0044790 I
PV07_03725 Cladophialophora immunda PV07_03725 I
CPUR_00789 Claviceps purpurea CPUR_00789 I
CIMG_04206 Coccidioides immitis CIMG_04206 I
CPC735_002210 Coccidioides posadasii CPC735_002210 I
estExt_Genewise1Plus.C_60215 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_60215 I
CGGC5_8021 Colletotrichum gloeosporioides CGGC5_8021 I
CH063_10569 Colletotrichum higginsianum CH063_10569 I
W97_06636 Coniosporium apollinis W97_06636 I
estExt_Genewise1.C_90067 Cryphonectria parasitica estExt_Genewise1.C_90067 I
HMPREF1541_00698 Cyphellophora europaea HMPREF1541_00698 I
DOTSEDRAFT_67939 Dothistroma septosporum DOTSEDRAFT_67939 I
A1O9_08054 Exophiala aquamarina A1O9_08054 I
HMPREF1120_03967 Exophiala dermatitidis HMPREF1120_03967 I
PV06_02578 Exophiala oligosperma PV06_02578 I
PV11_06702 Exophiala sideris PV11_06702 I
PV08_11378 Exophiala spinifera PV08_11378 I
PV05_09062 Exophiala xenobiotica PV05_09062 I
NechaG35775 Fusarium solani NechaG35775 I
FVEG_02315 Fusarium verticillioides FVEG_02315 I
LEMA_P051310.1 Leptosphaeria maculans LEMA_P051310.1 I
MPH_05179 Macrophomina phaseolina MPH_05179 I
MGG_00318 Magnaporthe oryzae MGG_00318 I
MBM_06071 Marssonina brunnea MBM_06071 I
MBR_02626 Metarhizium brunneum MBR_02626 I
MGU_00389 Metarhizium guizhouense MGU_00389 I
MAJ_00011 Metarhizium majus MAJ_00011 I
MGYG_01875 Microsporum gypseum MGYG_01875 I
e_gw1.1.1408.1 Mycosphaerella fijiensis e_gw1.1.1408.1 I
e_gw1.1.252.1 Mycosphaerella graminicola e_gw1.1.252.1 I
e_gw1.2.590.1 Nectria haematococca e_gw1.2.590.1 I
UCRNP2_6034 Neofusicoccum parvum UCRNP2_6034 I
NFIA_109950 Neosartorya fischeri CADNFIAG00010127 I
NCU05536 Neurospora crassa NCU05536 D
estExt_fgenesh2_pg.C_60336 Neurospora discreta estExt_fgenesh2_pg.C_60336 I
NEUTE1DRAFT_68861 Neurospora tetrasperma NEUTE1DRAFT_68861 I
OIDMADRAFT_53648 Oidiodendron maius OIDMADRAFT_53648 I
PMAA_027470 Penicillium marneffei PMAA_027470 I
PDE_09026 Penicillium oxalicum PDE_09026 I
U727_0043025041 Penicillium solitum U727_0043025041 I
PFICI_15217 Pestalotiopsis fici PFICI_15217 I
PODANS_4_4120 Podospora anserina PODANS_4_4120 I
MYCFIDRAFT_125368 Pseudocercospora fijiensis MYCFIDRAFT_125368 I
GMDG_01147 Pseudogymnoascus destructans GMDG_01147 I
V499_00565 Pseudogymnoascus pannorum V499_00565 I
PTT_09374 Pyrenophora teres PTT_09374 I
PTRG_00822 Pyrenophora triticirepentis PTRG_00822 I
Z518_02768 Rhinocladiella mackenziei Z518_02768 I
SAPIO_CDS10911 Scedosporium apiospermum SAPIO_CDS10911 I
SBOR_5623 Sclerotinia borealis SBOR_5623 I
SETTUDRAFT_122496 Setosphaeria turcica SETTUDRAFT_122496 I
SEPMUDRAFT_153702 Sphaerulina musiva SEPMUDRAFT_153702 I
HMPREF1624_06429 Sporothrix schenckii HMPREF1624_06429 I
S40288_06147 Stachybotrys chartarum S40288_06147 I
SNOG_07159 Stagonospora nodorum SNOG_07159 I
PMAA_027470 Talaromyces marneffei PMAA_027470 I
TSTA_071270 Talaromyces stipitatus TSTA_071270 I
THITE_2110543 Thielavia terrestris THITE_2110543 I
VHEMI06707 Torrubiella hemipterigena VHEMI06707 I
TRIATDRAFT_223010 Trichoderma atroviride TRIATDRAFT_223010 I
TRIVIDRAFT_113125 Trichoderma virens TRIVIDRAFT_113125 I
H105_04860 Trichophyton soudanense H105_04860 I
PV09_02460 Verruconis gallopava PV09_02460 I
VDBG_09267 Verticillium albo atrum VDBG_09267 I
VDBG_09267 Verticillium alfalfae VDBG_09267 I
VDAG_07426 Verticillium dahliae VDAG_07426 I
Mycgr3G34788 Zymoseptoria tritici Mycgr3G34788 I