CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GA21247
(
Drosophila pseudoobscura
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
FBgn0081235
T038502_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dimm
M03613_2.00
Drosophila melanogaster
BDCCATATGGHV
BDCCATATGGHV
SELEX
Nitta et al.(2015)
dimm_1
0.914
1.000
dimm
M03614_2.00
Drosophila melanogaster
BACCATATGGTV
BACCATATGGTV
SELEX
Nitta et al.(2015)
dimm_2
0.914
1.000
dimm
M05976_2.00
Drosophila melanogaster
HCCATATGGYG
CRCCATATGGD
B1H
Zhu et al.(2011)
dimm_da_SANGER_5_FBgn0023091
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0287853
bHLH
152
204
RRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSKIETLTLAKNYIINLT
Links
Other
bHLH
family TFs
Other
Drosophila pseudoobscura
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000004326
Ailuropoda melanoleuca
ENSAMEG00000004326
I
Alligator_sinensis_CCG010779.1
Alligator sinensis
Alligator_sinensis_CCG010779.1
I
Alligator_sinensis_CCG010961.2
Alligator sinensis
Alligator_sinensis_CCG010961.2
I
Alligator_sinensis_CCG019781.1
Alligator sinensis
Alligator_sinensis_CCG019781.1
I
ENSAPLG00000010506
Anas platyrhynchos
ENSAPLG00000010506
I
T
Anolis carolinensis
ENSACAG00000003467
I
TBX19
Anolis carolinensis
ENSACAG00000010693
I
Afo_R013116
Aptenodytes forsteri
Afo_R013116
I
ENSAMXG00000003991
Astyanax mexicanus
ENSAMXG00000003991
I
ENSAMXG00000013638
Astyanax mexicanus
ENSAMXG00000013638
I
BGIBMGA000322
Bombyx mori
BGIBMGA000322
I
ENSP00000356795-D1
Bos grunniens
ENSP00000356795-D1
I
TBX19
Bos taurus
ENSBTAG00000002952
I
T
Bos taurus
ENSBTAG00000018681
I
estExt_fgenesh2_pg.C_650149
Branchiostoma floridae
estExt_fgenesh2_pg.C_650149
I
estExt_GenewiseH_1.C_9340011
Branchiostoma floridae
estExt_GenewiseH_1.C_9340011
I
estExt_gwp.C_650221
Branchiostoma floridae
estExt_gwp.C_650221
I
estExt_gwp.C_9340008
Branchiostoma floridae
estExt_gwp.C_9340008
I
Brh_R012030
Buceros rhinoceros
Brh_R012030
I
T
Callithrix jacchus
ENSCJAG00000012508
I
TBX19
Callithrix jacchus
ENSCJAG00000016812
I
Aan_R012309
Calypte anna
Aan_R012309
I
Cflo_04209--XP_396427.2_APIME
Camponotus floridanus
Cflo_04209--XP_396427.2_APIME
I
T
Canis familiaris
ENSCAFG00000000807
I
TBX19
Canis familiaris
ENSCAFG00000015268
I
CapteG149486
Capitella teleta
CapteG149486
N
T
Cavia porcellus
ENSCPOG00000001358
I
TBX19
Cavia porcellus
ENSCPOG00000012456
I
Cmyd_10017804
Chelonia mydas
Cmyd_10017804
I
Cmyd_10020966
Chelonia mydas
Cmyd_10020966
I
ENSCSAG00000011055
Chlorocebus sabaeus
ENSCSAG00000011055
I
ENSCSAG00000012200
Chlorocebus sabaeus
ENSCSAG00000012200
I
TBX19
Choloepus hoffmanni
ENSCHOG00000010387
I
CLEC002870
Cimex lectularius
CLEC002870
I
CGI_10018059
Crassostrea gigas
CGI_10018059
I
tb
Danio rerio
ENSDARG00000039806
I
tbx19
Danio rerio
ENSDARG00000079187
I
ta
Danio rerio
ENSDARG00000101576
I
DAPPUDRAFT_44582
Daphnia pulex
DAPPUDRAFT_44582
I
TBX19
Dasypus novemcinctus
ENSDNOG00000015810
I
ENSDNOG00000016178
Dasypus novemcinctus
ENSDNOG00000016178
I
Tbx19
Dipodomys ordii
ENSDORG00000014860
I
T
Equus caballus
ENSECAG00000007994
I
TBX19
Equus caballus
ENSECAG00000010186
I
TBX19
Felis catus
ENSFCAG00000015047
I
ENSFALG00000005706
Ficedula albicollis
ENSFALG00000005706
I
ENSGMOG00000017391
Gadus morhua
ENSGMOG00000017391
I
ENSGMOG00000018941
Gadus morhua
ENSGMOG00000018941
I
T
Gallus gallus
ENSGALG00000011489
I
TBX19
Gallus gallus
ENSGALG00000015244
I
tb
Gasterosteus aculeatus
ENSGACG00000005258
I
Gfo_R000170
Geospiza fortis
Gfo_R000170
I
TBX19
Gorilla gorilla
ENSGGOG00000001338
I
T
Gorilla gorilla
ENSGGOG00000007693
I
Hsal_03707--XP_396427.2_APIME
Harpegnathos saltator
Hsal_03707--XP_396427.2_APIME
I
TBX19
Homo sapiens
ENSG00000143178
D
T
Homo sapiens
ENSG00000164458
D
XP_002164912.1
Hydra magnipapillata
XP_002164912.1
I
ENSSTOG00000019913
Ictidomys tridecemlineatus
ENSSTOG00000019913
I
ENSSTOG00000028238
Ictidomys tridecemlineatus
ENSSTOG00000028238
I
ENSLACG00000011042
Latimeria chalumnae
ENSLACG00000011042
I
ENSLACG00000015449
Latimeria chalumnae
ENSLACG00000015449
I
ENSLOCG00000003838
Lepisosteus oculatus
ENSLOCG00000003838
I
ENSLOCG00000010586
Lepisosteus oculatus
ENSLOCG00000010586
I
ENSLOCG00000016526
Lepisosteus oculatus
ENSLOCG00000016526
I
LotgiG154800
Lottia gigantea
LotgiG154800
I
TBX19
Loxodonta africana
ENSLAFG00000011227
I
T
Loxodonta africana
ENSLAFG00000012505
I
ENSMMUP00000022430
Macaca fascicularis
ENSMMUP00000022430
I
ENSP00000356795
Macaca fascicularis
ENSP00000356795
I
SFT2D2
Macaca mulatta
ENSMMUG00000005283
I
T
Macaca mulatta
ENSMMUG00000017047
I
MCINX002868
Melitaea cinxia
MCINX002868
I
TBX19
Microcebus murinus
ENSMICG00000007817
I
TBX19
Monodelphis domestica
ENSMODG00000002921
I
T
Monodelphis domestica
ENSMODG00000006318
I
ENSMPUG00000000522
Mustela putorius furo
ENSMPUG00000000522
I
Tbx19
Mus musculus
ENSMUSG00000026572
I
T
Mus musculus
ENSMUSG00000062327
D
Myotis_brandtii_TBX19_10024384
Myotis brandtii
Myotis_brandtii_TBX19_10024384
I
TBX19
Myotis lucifugus
ENSMLUG00000011933
I
NV14821
Nasonia vitripennis
NV14821
I
ENSNLEG00000011552
Nomascus leucogenys
ENSNLEG00000011552
I
ENSNLEG00000014917
Nomascus leucogenys
ENSNLEG00000014917
I
T
Ochotona princeps
ENSOPRG00000003376
I
TBX19
Ochotona princeps
ENSOPRG00000016564
I
SNAPOd2T00000418001
Oikopleura dioica
SNAPOd2T00000418001
I
Ogr19099
Ophisaurus gracilis
Ogr19099
I
ENSONIG00000007611
Oreochromis niloticus
ENSONIG00000007611
I
ENSONIG00000008985
Oreochromis niloticus
ENSONIG00000008985
I
ENSONIG00000009906
Oreochromis niloticus
ENSONIG00000009906
I
T
Ornithorhynchus anatinus
ENSOANG00000012289
I
T
Oryctolagus cuniculus
ENSOCUG00000000660
I
TBX19
Oryctolagus cuniculus
ENSOCUG00000014555
I
tb
Oryzias latipes
ENSORLG00000011262
I
me-t
Oryzias latipes
ENSORLG00000014067
I
TBX19
Otolemur garnettii
ENSOGAG00000004458
I
T
Otolemur garnettii
ENSOGAG00000007863
I
ENSOARG00000004863
Ovis aries
ENSOARG00000004863
I
ENSOARG00000012617
Ovis aries
ENSOARG00000012617
I
TBX19
Pan troglodytes
ENSPTRG00000001647
I
T
Pan troglodytes
ENSPTRG00000018789
I
ENSPANG00000005068
Papio anubis
ENSPANG00000005068
I
PHUM392580
Pediculus humanus
PHUM392580
I
ENSPSIG00000005649
Pelodiscus sinensis
ENSPSIG00000005649
I
ENSPSIG00000015509
Pelodiscus sinensis
ENSPSIG00000015509
I
ENSPFOG00000002451
Poecilia formosa
ENSPFOG00000002451
I
ENSPFOG00000006034
Poecilia formosa
ENSPFOG00000006034
I
ENSPFOG00000016071
Poecilia formosa
ENSPFOG00000016071
I
Pvit_02210
Pogona vitticeps
Pvit_02210
I
Pvit_04554
Pogona vitticeps
Pvit_04554
I
ENSPPYG00000017163
Pongo abelii
ENSPPYG00000017163
I
T
Rattus norvegicus
ENSRNOG00000012229
I
RPRC001186
Rhodnius prolixus
RPRC001186
I
Sakowv30011577m.g
Saccoglossus kowalevskii
Sakowv30011577m.g
I
ENSSHAG00000018904
Sarcophilus harrisii
ENSSHAG00000018904
I
ENSSHAG00000018940
Sarcophilus harrisii
ENSSHAG00000018940
I
SPU_013015
Strongylocentrotus purpuratus
SPU_013015
N
TBX19
Sus scrofa
ENSSSCG00000006299
I
T
Taeniopygia guttata
ENSTGUG00000009448
I
TBX19
Taeniopygia guttata
ENSTGUG00000013434
I
tbx19
Takifugu rubripes
ENSTRUG00000005718
I
tb
Takifugu rubripes
ENSTRUG00000011958
I
ta
Takifugu rubripes
ENSTRUG00000012130
I
ta
Tetraodon nigroviridis
ENSTNIG00000005634
I
tbx19
Tetraodon nigroviridis
ENSTNIG00000006586
I
tb
Tetraodon nigroviridis
ENSTNIG00000016613
I
TriadG25521
Trichoplax adhaerens
TriadG25521
I
T
Tursiops truncatus
ENSTTRG00000016665
I
TBX19
Vicugna pacos
ENSVPAG00000000446
I
1XBR_A
Xenopus laevis
1XBR_A
I
1XBR_B
Xenopus laevis
1XBR_B
I
t2.S
Xenopus laevis
XB-GENE-5981788
I
tbxt.L
Xenopus laevis
XB-GENE-6255736
I
tbxt.S
Xenopus laevis
XB-GENE-865212
I
tbxt
Xenopus tropicalis
XB-GENE-478789
I
t2
Xenopus tropicalis
XB-GENE-5981736
I
ENSXMAG00000006226
Xiphophorus maculatus
ENSXMAG00000006226
I
ENSXMAG00000011123
Xiphophorus maculatus
ENSXMAG00000011123
I
ENSXMAG00000012033
Xiphophorus maculatus
ENSXMAG00000012033
I