PGSC0003DMG400025976 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400025976 T043503_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.914 0.980
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.843 0.480
BIM1
M01710_2.00 		Arabidopsis thaliana
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH8114 		0.843 0.520
BIM1
M06739_2.00 		Arabidopsis thaliana
CACGTGAYNHNNNH
DNNNDNRTCACGTG		 Dap-seq
OMalley et al.(2016)
BIM1_col_a 		0.843 0.520
BIM1
M06740_2.00 		Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN
NNNDNDNDNDDRKCACGTGMBN		 Dap-seq
OMalley et al.(2016)
BIM1_colamp_a 		0.843 0.520
BIM1
M09787_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BIM1_01 		0.843 0.520
BIM2
M01701_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8089 		0.843 0.480
BIM2
M06727_2.00 		Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN
NNNNNNNNNNNVDCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_colamp 		0.843 0.480
BIM2
M06728_2.00 		Arabidopsis thaliana
CACGTGMBNNNCVYV
BRBGNNNVKCACGTG		 Dap-seq
OMalley et al.(2016)
BIM2_col_v3b 		0.843 0.480
PK05451.1
M01120_2.00 		Cannabis sativa
YCACGTGM
KCACGTGR		 PBM
Lambert et al.(2019)
pTH10100 		0.840 0.680
PIF3
M00854_2.00 		Arabidopsis thaliana
CACGTGSNN
NNSCACGTG		 PBM
Franco-Zorrilla et al.(2014)
PIF3 		0.840 0.660
PIF3
M00722_2.00 		Arabidopsis thaliana
NCACRTN
NAYGTGN		 PBM
Chang et al.(2013)
pTH8200 		0.840 0.660
PIF3
M08045_2.00 		Arabidopsis thaliana
HCACGTGGVH
DBCCACGTGD		 ChIP-seq
Mathelier et al.(2014)
MA0560.1 		0.840 0.660
PIF3
M09780_2.00 		Arabidopsis thaliana
BDRRRVCACGTGRVSHCD
HGDSBYCACGTGBYYYHV		 Transfac
Matys et al.(2006)
P$PIF3_01 		0.840 0.660
PIF3
M09781_2.00 		Arabidopsis thaliana
DDDVCCACGTGGVMVNB
VNBKBCCACGTGGBHHH		 Transfac
Matys et al.(2006)
P$PIF3_02 		0.840 0.660
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400066807 bHLH 282 331
PGSC0003DMT400066808 bHLH 282 331

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

423 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10012695 Chelonia mydas Cmyd_10012695 N 0.000
Cmyd_10014586 Chelonia mydas Cmyd_10014586 N 0.000
Cmyd_10014427 Chelonia mydas Cmyd_10014427 N 0.000
Cmyd_10013937 Chelonia mydas Cmyd_10013937 N 0.000
Cmyd_10013772 Chelonia mydas Cmyd_10013772 N 0.000
Cmyd_10013718 Chelonia mydas Cmyd_10013718 N 0.000
Cmyd_10013406 Chelonia mydas Cmyd_10013406 N 0.000
Cmyd_10013046 Chelonia mydas Cmyd_10013046 N 0.000
Cmyd_10012986 Chelonia mydas Cmyd_10012986 N 0.000
Cmyd_10012972 Chelonia mydas Cmyd_10012972 N 0.000
Cmyd_10012804 Chelonia mydas Cmyd_10012804 N 0.000
Cmyd_10014771 Chelonia mydas Cmyd_10014771 N 0.000
Cmyd_10012482 Chelonia mydas Cmyd_10012482 N 0.000
Cmyd_10012472 Chelonia mydas Cmyd_10012472 N 0.000
Cmyd_10012340 Chelonia mydas Cmyd_10012340 N 0.000
Cmyd_10012194 Chelonia mydas Cmyd_10012194 N 0.000
Cmyd_10012100 Chelonia mydas Cmyd_10012100 N 0.000
Cmyd_10012062 Chelonia mydas Cmyd_10012062 N 0.000
Cmyd_10012053 Chelonia mydas Cmyd_10012053 N 0.000
Cmyd_10012049 Chelonia mydas Cmyd_10012049 N 0.000
Cmyd_10011918 Chelonia mydas Cmyd_10011918 N 0.000
Cmyd_10011896 Chelonia mydas Cmyd_10011896 N 0.000
Cmyd_10016788 Chelonia mydas Cmyd_10016788 N 0.000
Cmyd_10018053 Chelonia mydas Cmyd_10018053 N 0.000
Cmyd_10017985 Chelonia mydas Cmyd_10017985 N 0.000
Cmyd_10017938 Chelonia mydas Cmyd_10017938 N 0.000
Cmyd_10017906 Chelonia mydas Cmyd_10017906 N 0.000
Cmyd_10017755 Chelonia mydas Cmyd_10017755 N 0.000
Cmyd_10017310 Chelonia mydas Cmyd_10017310 N 0.000
Cmyd_10017203 Chelonia mydas Cmyd_10017203 N 0.000
Cmyd_10017127 Chelonia mydas Cmyd_10017127 N 0.000
Cmyd_10016989 Chelonia mydas Cmyd_10016989 N 0.000
Cmyd_10016912 Chelonia mydas Cmyd_10016912 N 0.000
Cmyd_10011542 Chelonia mydas Cmyd_10011542 N 0.000
Cmyd_10016549 Chelonia mydas Cmyd_10016549 N 0.000
Cmyd_10016498 Chelonia mydas Cmyd_10016498 N 0.000
Cmyd_10016495 Chelonia mydas Cmyd_10016495 N 0.000
Cmyd_10016324 Chelonia mydas Cmyd_10016324 N 0.000
Cmyd_10016112 Chelonia mydas Cmyd_10016112 N 0.000
Cmyd_10016076 Chelonia mydas Cmyd_10016076 N 0.000
Cmyd_10015316 Chelonia mydas Cmyd_10015316 N 0.000
Cmyd_10015037 Chelonia mydas Cmyd_10015037 N 0.000
Cmyd_10014903 Chelonia mydas Cmyd_10014903 N 0.000
Cmyd_10014894 Chelonia mydas Cmyd_10014894 N 0.000
Cmyd_10004410 Chelonia mydas Cmyd_10004410 N 0.000
Cmyd_10006722 Chelonia mydas Cmyd_10006722 N 0.000
Cmyd_10006667 Chelonia mydas Cmyd_10006667 N 0.000
Cmyd_10006621 Chelonia mydas Cmyd_10006621 N 0.000
Cmyd_10006184 Chelonia mydas Cmyd_10006184 N 0.000
Cmyd_10005732 Chelonia mydas Cmyd_10005732 N 0.000
Cmyd_10005354 Chelonia mydas Cmyd_10005354 N 0.000
Cmyd_10004862 Chelonia mydas Cmyd_10004862 N 0.000
Cmyd_10004763 Chelonia mydas Cmyd_10004763 N 0.000
Cmyd_10004639 Chelonia mydas Cmyd_10004639 N 0.000
Cmyd_10004478 Chelonia mydas Cmyd_10004478 N 0.000
Cmyd_10006724 Chelonia mydas Cmyd_10006724 N 0.000
Cmyd_10003938 Chelonia mydas Cmyd_10003938 N 0.000
Cmyd_10003654 Chelonia mydas Cmyd_10003654 N 0.000
Cmyd_10003577 Chelonia mydas Cmyd_10003577 N 0.000
Cmyd_10003504 Chelonia mydas Cmyd_10003504 N 0.000
Cmyd_10003439 Chelonia mydas Cmyd_10003439 N 0.000
Cmyd_10003232 Chelonia mydas Cmyd_10003232 N 0.000
Cmyd_10003172 Chelonia mydas Cmyd_10003172 N 0.000
Cmyd_10003126 Chelonia mydas Cmyd_10003126 N 0.000
Cmyd_10002130 Chelonia mydas Cmyd_10002130 N 0.000
Cmyd_10001989 Chelonia mydas Cmyd_10001989 N 0.000
Cmyd_10009304 Chelonia mydas Cmyd_10009304 N 0.000
Cmyd_10011536 Chelonia mydas Cmyd_10011536 N 0.000
Cmyd_10011209 Chelonia mydas Cmyd_10011209 N 0.000
Cmyd_10011123 Chelonia mydas Cmyd_10011123 N 0.000
Cmyd_10011031 Chelonia mydas Cmyd_10011031 N 0.000
Cmyd_10010768 Chelonia mydas Cmyd_10010768 N 0.000
Cmyd_10010344 Chelonia mydas Cmyd_10010344 N 0.000
Cmyd_10009827 Chelonia mydas Cmyd_10009827 N 0.000
Cmyd_10009643 Chelonia mydas Cmyd_10009643 N 0.000
Cmyd_10009634 Chelonia mydas Cmyd_10009634 N 0.000
Cmyd_10009391 Chelonia mydas Cmyd_10009391 N 0.000
Cmyd_10001489 Chelonia mydas Cmyd_10001489 N 0.000
Cmyd_10008690 Chelonia mydas Cmyd_10008690 N 0.000
Cmyd_10008649 Chelonia mydas Cmyd_10008649 N 0.000
Cmyd_10008565 Chelonia mydas Cmyd_10008565 N 0.000
Cmyd_10008315 Chelonia mydas Cmyd_10008315 N 0.000
Cmyd_10007900 Chelonia mydas Cmyd_10007900 N 0.000
Cmyd_10007685 Chelonia mydas Cmyd_10007685 N 0.000
Cmyd_10007527 Chelonia mydas Cmyd_10007527 N 0.000
Cmyd_10007273 Chelonia mydas Cmyd_10007273 N 0.000
Cmyd_10007153 Chelonia mydas Cmyd_10007153 N 0.000