ATMYC2 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 scaffold_103634.1 T044497_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.914 1.000
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.914 1.000
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.914 0.979
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.914 0.979
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.914 0.958
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.890 0.896
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.917
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.858 0.604
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.646
BHLH14
M09785_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G00870_01 		0.840 0.792
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_103634.1 bHLH 453 500

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

561 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000005830 Ailuropoda melanoleuca ENSAMEG00000005830 I 0.000
ENSAMEG00000008160 Ailuropoda melanoleuca ENSAMEG00000008160 I 0.000
ENSAMEG00000015853 Ailuropoda melanoleuca ENSAMEG00000015853 I 0.000
Alligator_sinensis_CCG012713.1 Alligator sinensis Alligator_sinensis_CCG012713.1 I 0.000
Alligator_sinensis_CCG015231.1 Alligator sinensis Alligator_sinensis_CCG015231.1 I 0.000
ENSAPLG00000009645 Anas platyrhynchos ENSAPLG00000009645 I 0.000
TBX18 Anolis carolinensis ENSACAG00000003859 I 0.000
TBX15 Anolis carolinensis ENSACAG00000008131 I 0.000
Afo_R005490 Aptenodytes forsteri Afo_R005490 I 0.000
ENSAMXG00000004418 Astyanax mexicanus ENSAMXG00000004418 I 0.000
ENSAMXG00000005724 Astyanax mexicanus ENSAMXG00000005724 I 0.000
ENSAMXG00000013612 Astyanax mexicanus ENSAMXG00000013612 I 0.000
ENSP00000358437-D1 Bos grunniens ENSP00000358437-D1 I 0.000
ENSP00000358677-D1 Bos grunniens ENSP00000358677-D1 I 0.000
ENSP00000362390-D1 Bos grunniens ENSP00000362390-D1 I 0.000
TBX18 Bos taurus ENSBTAG00000018161 I 0.000
TBX22 Bos taurus ENSBTAG00000048060 I 0.000
e_gw.418.20.1 Branchiostoma floridae e_gw.418.20.1 I 0.000
estExt_fgenesh2_pg.C_1050030 Branchiostoma floridae estExt_fgenesh2_pg.C_1050030 I 0.000
Brh_R004487 Buceros rhinoceros Brh_R004487 I 0.000
TBX15 Callithrix jacchus ENSCJAG00000005662 I 0.000
TBX22 Callithrix jacchus ENSCJAG00000009617 I 0.000
TBX18 Callithrix jacchus ENSCJAG00000015218 I 0.000
Aan_R001146 Calypte anna Aan_R001146 I 0.000
Aan_R004737 Calypte anna Aan_R004737 I 0.000
Aan_R013329 Calypte anna Aan_R013329 I 0.000
TBX18 Canis familiaris ENSCAFG00000002987 I 0.000
TBX15 Canis familiaris ENSCAFG00000009976 I 0.000
TBX15 Cavia porcellus ENSCPOG00000000615 I 0.000
ENSCPOG00000008004 Cavia porcellus ENSCPOG00000008004 I 0.000
Cmyd_10005629 Chelonia mydas Cmyd_10005629 I 0.000
Cmyd_10007257 Chelonia mydas Cmyd_10007257 I 0.000
Cmyd_10014386 Chelonia mydas Cmyd_10014386 I 0.000
ENSCSAG00000001712 Chlorocebus sabaeus ENSCSAG00000001712 I 0.000
ENSCSAG00000010713 Chlorocebus sabaeus ENSCSAG00000010713 I 0.000
ENSCSAG00000017375 Chlorocebus sabaeus ENSCSAG00000017375 I 0.000
tbx15 Danio rerio ENSDARG00000002582 I 0.000
tbx18 Danio rerio ENSDARG00000036930 I 0.000
tbx22 Danio rerio ENSDARG00000091748 I 0.000
TBX15 Dasypus novemcinctus ENSDNOG00000003930 I 0.000
TBX18 Dasypus novemcinctus ENSDNOG00000049259 I 0.000
GF14392 Drosophila ananassae FBgn0091419 I 0.000
GG25073 Drosophila erecta FBgn0117202 I 0.000
mid Drosophila melanogaster FBgn0261963 D 0.000
GI17986 Drosophila mojavensis FBgn0140726 I 0.000
GA19742 Drosophila pseudoobscura FBgn0079738 I 0.000
GM18548 Drosophila sechellia FBgn0173455 I 0.000
GD23341 Drosophila simulans FBgn0194727 I 0.000
GJ19568 Drosophila virilis FBgn0206710 I 0.000
GK15086 Drosophila willistoni FBgn0217091 I 0.000
GE25417 Drosophila yakuba FBgn0242487 I 0.000
TBX18 Echinops telfairi ENSETEG00000006457 I 0.000
TBX22 Echinops telfairi ENSETEG00000006623 I 0.000
TBX18 Equus caballus ENSECAG00000005787 I 0.000
TBX22 Equus caballus ENSECAG00000014426 I 0.000
TBX15 Equus caballus ENSECAG00000023325 I 0.000
TBX15 Erinaceus europaeus ENSEEUG00000003919 I 0.000
TBX18 Erinaceus europaeus ENSEEUG00000013766 I 0.000
TBX22 Felis catus ENSFCAG00000002301 I 0.000
TBX18 Felis catus ENSFCAG00000012657 I 0.000
TBX15 Felis catus ENSFCAG00000023731 I 0.000
ENSFALG00000002783 Ficedula albicollis ENSFALG00000002783 I 0.000
ENSFALG00000005042 Ficedula albicollis ENSFALG00000005042 I 0.000
ENSGMOG00000003658 Gadus morhua ENSGMOG00000003658 I 0.000
TBX22 Gallus gallus ENSGALG00000004093 I 0.000
ENSGALG00000014776 Gallus gallus ENSGALG00000014776 I 0.000
ENSGALG00000015834 Gallus gallus ENSGALG00000015834 I 0.000
tbx18 Gasterosteus aculeatus ENSGACG00000005602 I 0.000
Gfo_R005492 Geospiza fortis Gfo_R005492 I 0.000
TBX22 Gorilla gorilla ENSGGOG00000008990 I 0.000
TBX15 Gorilla gorilla ENSGGOG00000013468 I 0.000
TBX18 Gorilla gorilla ENSGGOG00000027982 I 0.000
TBX15 Homo sapiens ENSG00000092607 D 0.000
TBX18 Homo sapiens ENSG00000112837 D 0.000
TBX22 Homo sapiens ENSG00000122145 D 0.000
ENSSTOG00000003725 Ictidomys tridecemlineatus ENSSTOG00000003725 I 0.000
ENSSTOG00000013040 Ictidomys tridecemlineatus ENSSTOG00000013040 I 0.000
ENSSTOG00000020544 Ictidomys tridecemlineatus ENSSTOG00000020544 I 0.000
ENSLACG00000006381 Latimeria chalumnae ENSLACG00000006381 I 0.000
ENSLACG00000015964 Latimeria chalumnae ENSLACG00000015964 I 0.000
ENSLOCG00000011023 Lepisosteus oculatus ENSLOCG00000011023 I 0.000
ENSLOCG00000014991 Lepisosteus oculatus ENSLOCG00000014991 I 0.000
ENSLOCG00000016254 Lepisosteus oculatus ENSLOCG00000016254 I 0.000
TBX22 Loxodonta africana ENSLAFG00000001881 I 0.000
TBX18 Loxodonta africana ENSLAFG00000015009 I 0.000
TBX15 Loxodonta africana ENSLAFG00000018452 I 0.000
LCUP000433 Lucilia cuprina LCUP000433 I 0.000
ENSP00000358437 Macaca fascicularis ENSP00000358437 I 0.000
ENSP00000358677 Macaca fascicularis ENSP00000358677 I 0.000
ENSP00000362390 Macaca fascicularis ENSP00000362390 I 0.000
TBX22 Macaca mulatta ENSMMUG00000009102 I 0.000
TBX15 Macaca mulatta ENSMMUG00000009257 I 0.000
TBX18 Macaca mulatta ENSMMUG00000010599 I 0.000
TBX22 Meleagris gallopavo ENSMGAG00000001700 I 0.000
TBX18 Meleagris gallopavo ENSMGAG00000013715 I 0.000
TBX15 Meleagris gallopavo ENSMGAG00000014235 I 0.000
TBX22 Microcebus murinus ENSMICG00000009019 I 0.000
TBX22 Monodelphis domestica ENSMODG00000004255 I 0.000
TBX15 Monodelphis domestica ENSMODG00000005319 I 0.000
TBX18 Monodelphis domestica ENSMODG00000018361 I 0.000
MDOA010319 Musca domestica MDOA010319 I 0.000
ENSMPUG00000001549 Mustela putorius furo ENSMPUG00000001549 I 0.000
ENSMPUG00000005346 Mustela putorius furo ENSMPUG00000005346 I 0.000
ENSMPUG00000012619 Mustela putorius furo ENSMPUG00000012619 I 0.000
Tbx15 Mus musculus ENSMUSG00000027868 I 0.000
Tbx22 Mus musculus ENSMUSG00000031241 I 0.000
Tbx18 Mus musculus ENSMUSG00000032419 I 0.000
Myotis_brandtii_Tbx15_10011211 Myotis brandtii Myotis_brandtii_Tbx15_10011211 I 0.000
Myotis_brandtii_TBX18_10024963 Myotis brandtii Myotis_brandtii_TBX18_10024963 I 0.000
Myotis_brandtii_Tbx22_10010932 Myotis brandtii Myotis_brandtii_Tbx22_10010932 I 0.000
TBX15 Myotis lucifugus ENSMLUG00000002958 I 0.000
TBX18 Myotis lucifugus ENSMLUG00000011326 I 0.000
TBX22 Myotis lucifugus ENSMLUG00000016826 I 0.000
NEMVEDRAFT_v1g88753 Nematostella vectensis NEMVEDRAFT_v1g88753 I 0.000
ENSNLEG00000012797 Nomascus leucogenys ENSNLEG00000012797 I 0.000
TBX15 Ochotona princeps ENSOPRG00000004847 I 0.000
Ogr00863 Ophisaurus gracilis Ogr00863 I 0.000
Ogr03354 Ophisaurus gracilis Ogr03354 I 0.000
Ogr10944 Ophisaurus gracilis Ogr10944 I 0.000
ENSONIG00000001051 Oreochromis niloticus ENSONIG00000001051 I 0.000
ENSONIG00000015685 Oreochromis niloticus ENSONIG00000015685 I 0.000
ENSONIG00000017642 Oreochromis niloticus ENSONIG00000017642 I 0.000
TBX18 Oryctolagus cuniculus ENSOCUG00000002026 I 0.000
TBX15 Oryctolagus cuniculus ENSOCUG00000012320 I 0.000
TBX22 Oryctolagus cuniculus ENSOCUG00000013685 I 0.000
TBX22 Otolemur garnettii ENSOGAG00000002759 I 0.000
TBX18 Otolemur garnettii ENSOGAG00000004300 I 0.000
TBX15 Otolemur garnettii ENSOGAG00000007282 I 0.000
ENSOARG00000000455 Ovis aries ENSOARG00000000455 I 0.000
ENSOARG00000013317 Ovis aries ENSOARG00000013317 I 0.000
ENSOARG00000020376 Ovis aries ENSOARG00000020376 I 0.000
TBX15 Pan troglodytes ENSPTRG00000001172 I 0.000
TBX18 Pan troglodytes ENSPTRG00000018390 I 0.000
TBX22 Pan troglodytes ENSPTRG00000022058 I 0.000
ENSPANG00000004604 Papio anubis ENSPANG00000004604 I 0.000
ENSPANG00000025094 Papio anubis ENSPANG00000025094 I 0.000
ENSPSIG00000005286 Pelodiscus sinensis ENSPSIG00000005286 I 0.000
ENSPSIG00000013362 Pelodiscus sinensis ENSPSIG00000013362 I 0.000
ENSPSIG00000017560 Pelodiscus sinensis ENSPSIG00000017560 I 0.000
ENSPFOG00000000670 Poecilia formosa ENSPFOG00000000670 I 0.000
ENSPFOG00000003081 Poecilia formosa ENSPFOG00000003081 I 0.000
ENSPFOG00000018033 Poecilia formosa ENSPFOG00000018033 I 0.000
Pvit_04496 Pogona vitticeps Pvit_04496 I 0.000
Pvit_09354 Pogona vitticeps Pvit_09354 I 0.000
Pvit_12384 Pogona vitticeps Pvit_12384 I 0.000
ENSPPYG00000000968 Pongo abelii ENSPPYG00000000968 I 0.000
ENSPPYG00000016815 Pongo abelii ENSPPYG00000016815 I 0.000
ENSPPYG00000020504 Pongo abelii ENSPPYG00000020504 I 0.000
TBX15 Procavia capensis ENSPCAG00000016333 I 0.000
TBX22 Pteropus vampyrus ENSPVAG00000008832 I 0.000
TBX15 Pteropus vampyrus ENSPVAG00000015733 I 0.000
TBX18 Pteropus vampyrus ENSPVAG00000016771 I 0.000
Tbx22 Rattus norvegicus ENSRNOG00000002346 I 0.000
Tbx18 Rattus norvegicus ENSRNOG00000010685 I 0.000
Tbx15 Rattus norvegicus ENSRNOG00000019565 I 0.000
ENSSHAG00000010820 Sarcophilus harrisii ENSSHAG00000010820 I 0.000
ENSSHAG00000012785 Sarcophilus harrisii ENSSHAG00000012785 I 0.000
ENSSARG00000007424 Sorex araneus ENSSARG00000007424 I 0.000
TBX18 Sus scrofa ENSSSCG00000004290 I 0.000
TBX22 Sus scrofa ENSSSCG00000012449 I 0.000
TBX22 Taeniopygia guttata ENSTGUG00000002573 I 0.000
TBX18 Taeniopygia guttata ENSTGUG00000012504 I 0.000
tbx18 Takifugu rubripes ENSTRUG00000001419 I 0.000
tbx15 Takifugu rubripes ENSTRUG00000003945 I 0.000
TBX22 Takifugu rubripes ENSTRUG00000010801 I 0.000
ENSTSYG00000007267 Tarsius syrichta ENSTSYG00000007267 I 0.000
tbx18 Tetraodon nigroviridis ENSTNIG00000009690 I 0.000
tbx15 Tetraodon nigroviridis ENSTNIG00000015660 I 0.000
TBX18 Tupaia belangeri ENSTBEG00000007925 I 0.000
TBX22 Tupaia belangeri ENSTBEG00000010144 I 0.000
TBX18 Tursiops truncatus ENSTTRG00000005713 I 0.000
TBX15 Tursiops truncatus ENSTTRG00000011006 I 0.000
TBX22 Tursiops truncatus ENSTTRG00000014058 I 0.000
Tal_R000620 Tyto alba Tal_R000620 I 0.000
TBX18 Vicugna pacos ENSVPAG00000006869 I 0.000
ENSVPAG00000010265 Vicugna pacos ENSVPAG00000010265 I 0.000
TBX22 Vicugna pacos ENSVPAG00000011942 I 0.000
tbx15 Xenopus tropicalis XB-GENE-483924 I 0.000
tbx18 Xenopus tropicalis XB-GENE-489907 I 0.000
tbx22 Xenopus tropicalis XB-GENE-994522 I 0.000
ENSXMAG00000010831 Xiphophorus maculatus ENSXMAG00000010831 I 0.000
ENSXMAG00000015062 Xiphophorus maculatus ENSXMAG00000015062 I 0.000