Alligator_sinensis_CCG005947.1 (Alligator sinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Alligator_sinensis_CCG005947.1 T046640_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MLX
M01114_2.00 		Monodelphis domestica
NNNCACGTGN
NCACGTGNNN		 PBM
Lambert et al.(2019)
pTH11463 		0.868 0.964
Mlx
M00752_2.00 		Mus musculus
CACGTGNNN
NNNCACGTG		 PBM
Weirauch et al.(2013)
pTH2882 		0.868 0.945
Mlx
M01721_2.00 		Mus musculus
NCRCGTGNNN
NNNCACGYGN		 PBM
Weirauch et al.(2014)
pTH5070 		0.868 0.945
MLX
M02779_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Jolma et al.(2013)
MLX_1 		0.868 0.945
Mlx
M02815_2.00 		Mus musculus
RTCACGTGAY
RTCACGTGAY		 SELEX
Jolma et al.(2013)
Mlx_1 		0.868 0.945
MLX
M04080_2.00 		Homo sapiens
NCACGTGN
NCACGTGN		 SELEX
Yin et al.(2017)
MLX_eDBD_HT-SELEX 		0.868 0.945
MLX
M04082_2.00 		Homo sapiens
NVCACGTGVYN
NRBCACGTGBN		 SELEX
Yin et al.(2017)
MLX_FL_HT-SELEX 		0.868 0.945
MLX
M04081_2.00 		Homo sapiens
NCACRTGV
BCAYGTGN		 SELEX
Yin et al.(2017)
MLX_eDBD_Methyl-HT-SELEX 		0.868 0.945
MLX
M04083_2.00 		Homo sapiens
NDBCACRTGBV
BVCAYGTGVHN		 SELEX
Yin et al.(2017)
MLX_FL_Methyl-HT-SELEX 		0.868 0.945
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG005947.1 bHLH 113 171

Links

Other bHLH family TFs
Other Alligator sinensis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006549 Ailuropoda melanoleuca ENSAMEG00000006549 I 0.868
ENSAPLG00000003549 Anas platyrhynchos ENSAPLG00000003549 I 0.889
MLX Anolis carolinensis ENSACAG00000013679 I 0.914
Afo_R011293 Aptenodytes forsteri Afo_R011293 N 0.841
ENSP00000246912-D1 Bos grunniens ENSP00000246912-D1 I 0.894
MLX Bos taurus ENSBTAG00000046670 I 0.894
MLX Callithrix jacchus ENSCJAG00000005011 I 0.868
Aan_R006200 Calypte anna Aan_R006200 I 0.841
MLX Canis familiaris ENSCAFG00000029102 I 0.868
Cmyd_10007085 Chelonia mydas Cmyd_10007085 I 0.889
ENSCSAG00000003241 Chlorocebus sabaeus ENSCSAG00000003241 I 0.868
MLX Dasypus novemcinctus ENSDNOG00000045315 I 0.868
MLX Echinops telfairi ENSETEG00000017247 I 0.868
MLX Equus caballus ENSECAG00000023980 I 0.868
MLX Felis catus ENSFCAG00000011667 I 0.868
MLX Gorilla gorilla ENSGGOG00000010869 I 0.868
MLX Homo sapiens ENSG00000108788 D 0.868
ENSSTOG00000003660 Ictidomys tridecemlineatus ENSSTOG00000003660 I 0.868
ENSLACG00000007918 Latimeria chalumnae ENSLACG00000007918 I 0.838
MLX Loxodonta africana ENSLAFG00000000328 I 0.868
ENSP00000246912 Macaca fascicularis ENSP00000246912 I 0.868
MLX Macaca mulatta ENSMMUG00000009887 I 0.868
MLX Microcebus murinus ENSMICG00000010258 I 0.868
MLX Monodelphis domestica ENSMODG00000014918 D 0.868
ENSMPUG00000010285 Mustela putorius furo ENSMPUG00000010285 I 0.868
Mlx Mus musculus ENSMUSG00000017801 D 0.868
MLX Myotis lucifugus ENSMLUG00000016670 I 0.868
MLX Ochotona princeps ENSOPRG00000012322 I 0.868
Ogr17012 Ophisaurus gracilis Ogr17012 I 0.889
MLX Oryctolagus cuniculus ENSOCUG00000015210 I 0.868
MLX Otolemur garnettii ENSOGAG00000009867 I 0.868
ENSOARG00000002343 Ovis aries ENSOARG00000002343 I 0.868
MLX Pan troglodytes ENSPTRG00000009208 I 0.868
ENSPANG00000021416 Papio anubis ENSPANG00000021416 I 0.868
ENSPSIG00000015412 Pelodiscus sinensis ENSPSIG00000015412 I 0.889
Pvit_17633 Pogona vitticeps Pvit_17633 I 0.889
ENSPPYG00000008387 Pongo abelii ENSPPYG00000008387 I 0.868
MLX Procavia capensis ENSPCAG00000014225 I 0.868
MLX Pteropus vampyrus ENSPVAG00000016556 I 0.868
Mlx Rattus norvegicus ENSRNOG00000019983 I 0.868
ENSSHAG00000014167 Sarcophilus harrisii ENSSHAG00000014167 I 0.868
MLX Sorex araneus ENSSARG00000014166 I 0.868
MLX Sus scrofa ENSSSCG00000017397 I 0.868
ENSTSYG00000007534 Tarsius syrichta ENSTSYG00000007534 I 0.868
MLX Tupaia belangeri ENSTBEG00000002111 I 0.868
MLX Tursiops truncatus ENSTTRG00000016407 I 0.868