Cucsa.242940 (Cucumis sativus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cucsa.242940 T048203_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.914 0.980
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.868 0.824
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.868 0.824
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.868 0.824
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.855 0.804
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.855 0.804
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.855 0.804
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.855 0.784
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.842 0.765
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.842 0.765
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.839 0.725
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.839 0.706
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.839 0.706
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.242940.1 bHLH 208 258

Links

Other bHLH family TFs
Other Cucumis sativus TFs

740 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATWHY2 Arabidopsis lyrata scaffold_202038.1 N
WHY2 Arabidopsis thaliana AT1G71260 N
Bostr.10273s0220 Boechera stricta Bostr.10273s0220 N
Bo6g112840 Brassica oleracea Bo6g112840 N
Bra016150 Brassica rapa Bra016150 N
PK20247.1 Cannabis sativa PK20247.1 N
Cagra.0147s0016 Capsella grandiflora Cagra.0147s0016 N
Carubv10020880m.g Capsella rubella Carubv10020880m.g N
evm.TU.supercontig_249.9 Carica papaya evm.TU.supercontig_249.9 N
orange1.1g026312m.g Citrus sinensis orange1.1g026312m.g N
Eucgr.K01091 Eucalyptus grandis Eucgr.K01091 N
Thhalv10019058m.g Eutrema salsugineum Thhalv10019058m.g N
GLYMA19G43880 Glycine max GLYMA19G43880 N
GLYMA03G41270 Glycine max GLYMA03G41270 N
Gorai.004G266000 Gossypium raimondii Gorai.004G266000 N
MLOC_19666 Hordeum vulgare MLOC_19666 N
Lus10035067.g Linum usitatissimum Lus10035067.g N
Lus10017892.g Linum usitatissimum Lus10017892.g N
chr1.LjT14G19.90.nc Lotus japonicus chr1.LjT14G19.90.nc N
MDP0000168614 Malus domestica MDP0000168614 N
cassava9661.m1 Manihot esculenta cassava9661.m1 N
cassava9653.m1 Manihot esculenta cassava9653.m1 N
cassava24783.valid.m1 Manihot esculenta cassava24783.valid.m1 N
MTR_7g116270 Medicago truncatula MTR_7g116270 N
mgf015710m Mimulus guttatus mgf015710m N
ATWHY2 Populus trichocarpa POPTR_0003s04700 N
Pm022821 Prunus mume Pm022821 N
PRUPE_ppa011529mg Prunus persica PRUPE_ppa011529mg N
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N
Solyc11g044750.1 Solanum lycopersicum Solyc11g044750.1 N
PGSC0003DMG400022930 Solanum tuberosum PGSC0003DMG400022930 N
TCM_035992 Theobroma cacao TCM_035992 N