e_gw.302.11.1 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 e_gw.302.11.1 T048280_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASCL1
M04135_2.00 		Homo sapiens
NRCASSTGYN
NRCASSTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_HT-SELEX 		0.842 0.820
ASCL1
M08055_2.00 		Homo sapiens
NNRGCAGCTGSNN
NNSCAGCTGCYNN		 ChIP-seq
Mathelier et al.(2014)
MA1100.1 		0.842 0.820
ASCL1
M08730_2.00 		Homo sapiens
NNVCASCTGCYBYN
NRVRGCAGSTGBNN		 Misc
Kulakovskiy et al.(2013)
ASCL1_HUMAN.H11MO.0.A 		0.842 0.820
Ascl1
M08748_2.00 		Mus musculus
BHSCASCTGCYBBN
NVVRGCAGSTGSDV		 Misc
Kulakovskiy et al.(2013)
ASCL1_MOUSE.H11MO.0.A 		0.842 0.820
Ascl1
M09464_2.00 		Mus musculus
NVCABCTGBBNN
NNVVCAGVTGBN		 Misc
Heinz et al.(2010)
NeuralTubes-Ascl1_GSE55840 		0.842 0.820
ASCL1
M09855_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_01 		0.842 0.820
ASCL1
M09856_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_02 		0.842 0.820
ASCL1
M09857_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6 		0.842 0.820
ASCL1
M04136_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_Methyl-HT-SELEX 		0.842 0.820
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.302.11.1 bHLH 68 118

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018137 Ailuropoda melanoleuca ENSAMEG00000018137 N
Alligator_sinensis_CCG010116.1 Alligator sinensis Alligator_sinensis_CCG010116.1 N
THAP5 Anolis carolinensis ENSACAG00000001543 N
ENSP00000400500-D1 Bos grunniens ENSP00000400500-D1 N
THAP5 Bos taurus ENSBTAG00000021869 N
Brh_R008791 Buceros rhinoceros Brh_R008791 N
THAP5 Callithrix jacchus ENSCJAG00000016711 N
THAP5 Canis familiaris ENSCAFG00000003290 N
ENSCPOG00000001682 Cavia porcellus ENSCPOG00000001682 N
Cmyd_10009233 Chelonia mydas Cmyd_10009233 N
ENSCSAG00000011171 Chlorocebus sabaeus ENSCSAG00000011171 N
ENSDNOG00000033245 Dasypus novemcinctus ENSDNOG00000033245 N
THAP5 Equus caballus ENSECAG00000012033 N
THAP5 Felis catus ENSFCAG00000030075 N
ENSFALG00000009293 Ficedula albicollis ENSFALG00000009293 N
THAP5 Gallus gallus ENSGALG00000009494 N
Gfo_R011510 Geospiza fortis Gfo_R011510 N
THAP5 Homo sapiens ENSG00000177683 N
ENSSTOG00000022120 Ictidomys tridecemlineatus ENSSTOG00000022120 N
ENSLACG00000010000 Latimeria chalumnae ENSLACG00000010000 N
THAP5 Loxodonta africana ENSLAFG00000017693 N
ENSP00000400500 Macaca fascicularis ENSP00000400500 N
THAP5 Monodelphis domestica ENSMODG00000024563 N
ENSMPUG00000007795 Mustela putorius furo ENSMPUG00000007795 N
Myotis_brandtii_THAP5_10020088 Myotis brandtii Myotis_brandtii_THAP5_10020088 N
THAP5 Myotis lucifugus ENSMLUG00000015130 N
ENSNLEG00000008290 Nomascus leucogenys ENSNLEG00000008290 N
Ogr11944 Ophisaurus gracilis Ogr11944 N
ENSOCUG00000024652 Oryctolagus cuniculus ENSOCUG00000024652 N
ENSOARG00000003531 Ovis aries ENSOARG00000003531 N
THAP5 Pan troglodytes ENSPTRG00000019592 N
ENSPSIG00000007406 Pelodiscus sinensis ENSPSIG00000007406 N
Pvit_15103 Pogona vitticeps Pvit_15103 N
ENSSHAG00000012010 Sarcophilus harrisii ENSSHAG00000012010 N
ENSSSCG00000026122 Sus scrofa ENSSSCG00000026122 N
THAP5 Taeniopygia guttata ENSTGUG00000005607 N