gw.349.31.1 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 gw.349.31.1 T048683_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TAL1
M08734_2.00 		Homo sapiens
BSTTATCWSNNNNNNVCVV
BBGBNNNNNNSWGATAASV		 Misc
Kulakovskiy et al.(2013)
TAL1_HUMAN.H11MO.0.A 		0.888 0.923
Tal1
M08759_2.00 		Mus musculus
BYKBNNNNNNVWGATAAVVN
NBBTTATCWBNNNNNNVMRV		 Misc
Kulakovskiy et al.(2013)
TAL1_MOUSE.H11MO.0.A 		0.888 0.923
Tal1
M09471_2.00 		Mus musculus
NVCWKMWG
CWKMWGBN		 Misc
Heinz et al.(2010)
HPC7-Scl_GSE13511 		0.888 0.923
Tal1
M09472_2.00 		Mus musculus
YTATCWSNNNNNNVCAGVHN
NDBCTGBNNNNNNSWGATAR		 Misc
Heinz et al.(2010)
Ter119-SCL_GSE18720 		0.888 0.923
TAL1
M09870_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TAL1_01 		0.888 0.923
TAL1
M09871_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TAL1_Q6_01 		0.888 0.923
TAL1
M09872_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TAL1_Q6 		0.888 0.923
LYL1
M08714_2.00 		Homo sapiens
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB		 Misc
Kulakovskiy et al.(2013)
LYL1_HUMAN.H11MO.0.A 		0.888 0.865
Lyl1
M08763_2.00 		Mus musculus
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB		 Misc
Kulakovskiy et al.(2013)
LYL1_MOUSE.H11MO.0.A 		0.853 0.846
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw.349.31.1 bHLH 3 55

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB05056.1 Alternaria brassicicola AB05056.1 N 0.000
e_gw1.00710.51.1 Aspergillus carbonarius e_gw1.00710.51.1 I 0.000
fgenesh1_pm.00168_#_452 Aspergillus carbonarius fgenesh1_pm.00168_#_452 I 0.000
ACLA_002350 Aspergillus clavatus CADACLAG00000323 I 0.000
CADAFLAG00000370 Aspergillus flavus CADAFLAG00000370 I 0.000
AFUA_5G02800 Aspergillus fumigatus CADAFUAG00002739 I 0.000
ANIA_11222 Aspergillus nidulans CADANIAG00001045 D 0.000
ANIA_05691 Aspergillus nidulans CADANIAG00003374 I 0.000
ANIA_06846 Aspergillus nidulans CADANIAG00007644 D 0.000
BAUCODRAFT_45255 Baudoinia compniacensis BAUCODRAFT_45255 N 0.000
BBA_00105 Beauveria bassiana BBA_00105 N 0.000
COCMIDRAFT_107123 Bipolaris oryzae COCMIDRAFT_107123 I 0.000
Bcin04g01240 Botrytis cinerea Bcin04g01240 I 0.000
PVAR5_3228 Byssochlamys spectabilis PVAR5_3228 I 0.000
Z519_09408 Cladophialophora bantiana Z519_09408 N 0.000
G647_00858 Cladophialophora carrionii G647_00858 I 0.000
PV07_01614 Cladophialophora immunda PV07_01614 I 0.000
A1O5_08185 Cladophialophora psammophila A1O5_08185 N 0.000
CFIO01_07975 Colletotrichum fioriniae CFIO01_07975 I 0.000
CFIO01_06299 Colletotrichum fioriniae CFIO01_06299 N 0.000
CGGC5_14706 Colletotrichum gloeosporioides CGGC5_14706 I 0.000
GLRG_00281 Colletotrichum graminicola GLRG_00281 I 0.000
CCM_05008 Cordyceps militaris CCM_05008 N 0.000
HMPREF1120_08148 Exophiala dermatitidis HMPREF1120_08148 I 0.000
PV06_10546 Exophiala oligosperma PV06_10546 I 0.000
PV06_07392 Exophiala oligosperma PV06_07392 I 0.000
PV11_05379 Exophiala sideris PV11_05379 N 0.000
PV05_03077 Exophiala xenobiotica PV05_03077 I 0.000
FFUJ_00121 Fusarium fujikuroi FFUJ_00121 I 0.000
NechaG103320 Fusarium solani NechaG103320 I 0.000
JAAARDRAFT_136956 Jaapia argillacea JAAARDRAFT_136956 I 0.000
Kwal_6732 Kluyveromyces waltii Kwal_6732 I 0.000
KUCA_T00002773001 Kuraishia capsulata KUCA_T00002773001 I 0.000
MBM_00253 Marssonina brunnea MBM_00253 I 0.000
X797_008651 Metarhizium robertsii X797_008651 I 0.000
estExt_fgenesh1_pm.C_sca_18_chr2_1_00122 Nectria haematococca estExt_fgenesh1_pm.C_sca_18_chr2_1_00122 I 0.000
NFIA_039290 Neosartorya fischeri CADNFIAG00003792 I 0.000
NCU00017 Neurospora crassa NCU00017 D 0.000
estExt_fgenesh3_pm.C_50537 Neurospora discreta estExt_fgenesh3_pm.C_50537 I 0.000
NEUTE1DRAFT_129586 Neurospora tetrasperma NEUTE1DRAFT_129586 I 0.000
HPODL_04541 Ogataea parapolymorpha HPODL_04541 N 0.000
OIDMADRAFT_109168 Oidiodendron maius OIDMADRAFT_109168 I 0.000
V499_09323 Pseudogymnoascus pannorum V499_09323 N 0.000
TSTA_122850 Talaromyces stipitatus TSTA_122850 I 0.000
VHEMI07932 Torrubiella hemipterigena VHEMI07932 N 0.000
VHEMI03513 Torrubiella hemipterigena VHEMI03513 I 0.000
VHEMI02171 Torrubiella hemipterigena VHEMI02171 I 0.000
TRIATDRAFT_31829 Trichoderma atroviride TRIATDRAFT_31829 I 0.000
TRIREDRAFT_106244 Trichoderma reesei TRIREDRAFT_106244 I 0.000
TRIVIDRAFT_55531 Trichoderma virens TRIVIDRAFT_55531 I 0.000
PV09_00611 Verruconis gallopava PV09_00611 N 0.000
VDAG_08992 Verticillium dahliae VDAG_08992 I 0.000