CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf013689m
(
Mimulus guttatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
mgf013689m
T048764_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC
GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.914
0.980
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN
NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.901
0.902
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.901
0.902
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.888
0.941
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC
GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.888
0.941
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH
DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.875
0.922
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.875
0.902
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY
RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.875
0.902
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.875
0.902
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN
NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.868
0.804
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.864
0.843
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.864
0.824
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT
ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.864
0.824
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf013689m
bHLH
202
252
ATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQ
Links
Other
bHLH
family TFs
Other
Mimulus guttatus
TFs
884 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_28813
Aegilops tauschii
F775_28813
I
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
NAC002
Arabidopsis thaliana
AT1G01720
D
Bostr.5325s0094
Boechera stricta
Bostr.5325s0094
I
BRADI2G57100
Brachypodium distachyon
BRADI2G57100
I
Bo5g001100
Brassica oleracea
Bo5g001100
I
Bra033239
Brassica rapa
Bra033239
I
PK26157.1
Cannabis sativa
PK26157.1
I
Cagra.1968s0112
Capsella grandiflora
Cagra.1968s0112
I
Carubv10009926m.g
Capsella rubella
Carubv10009926m.g
I
GLYMA14G24220
Glycine max
GLYMA14G24220
I
GLYMA05G32850
Glycine max
GLYMA05G32850
I
Gorai.010G051900
Gossypium raimondii
Gorai.010G051900
I
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
MLOC_59162
Hordeum vulgare
MLOC_59162
I
LPERR01G34090
Leersia perrieri
LPERR01G34090
I
LPERR05G13490
Leersia perrieri
LPERR05G13490
I
cassava28909.valid.m1
Manihot esculenta
cassava28909.valid.m1
I
MTR_8g094580
Medicago truncatula
MTR_8g094580
I
mgf004020m
Mimulus guttatus
mgf004020m
I
GSMUA_Achr6G18720_001
Musa acuminata
GSMUA_Achr6G18720_001
I
OBART01G39590
Oryza barthii
OBART01G39590
I
OB05G24820
Oryza brachyantha
OB05G24820
I
OB01G48340
Oryza brachyantha
OB01G48340
I
ORGLA01G0334900
Oryza glaberrima
ORGLA01G0334900
I
ORGLA05G0146600
Oryza glaberrima
ORGLA05G0146600
I
OGLUM05G17980
Oryza glumaepatula
OGLUM05G17980
I
OGLUM01G43820
Oryza glumaepatula
OGLUM01G43820
I
BGIOSGA000374
Oryza indica
BGIOSGA000374
I
BGIOSGA019897
Oryza indica
BGIOSGA019897
I
OMERI01G36460
Oryza meridionalis
OMERI01G36460
I
ONIVA05G17670
Oryza nivara
ONIVA05G17670
I
ONIVA01G44460
Oryza nivara
ONIVA01G44460
I
OPUNC01G38300
Oryza punctata
OPUNC01G38300
I
ORUFI05G18190
Oryza rufipogon
ORUFI05G18190
I
ORUFI01G42940
Oryza rufipogon
ORUFI01G42940
I
NAC48
Oryza sativa
OS01G0884300
D
Pavir.Ea03621
Panicum virgatum
Pavir.Ea03621
I
Pavir.J04049
Panicum virgatum
Pavir.J04049
I
POPTR_0007s04780
Populus trichocarpa
POPTR_0007s04780
I
POPTR_0005s07060
Populus trichocarpa
POPTR_0005s07060
I
SapurV1A.3767s0010
Salix purpurea
SapurV1A.3767s0010
I
SapurV1A.2021s0010
Salix purpurea
SapurV1A.2021s0010
I
SapurV1A.0740s0040
Salix purpurea
SapurV1A.0740s0040
I
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
SapurV1A.0311s0230
Salix purpurea
SapurV1A.0311s0230
I
SapurV1A.0039s0530
Salix purpurea
SapurV1A.0039s0530
I
Si002413m.g
Setaria italica
Si002413m.g
I
Solyc11g017470.1
Solanum lycopersicum
Solyc11g017470.1
I
Sb03g041920
Sorghum bicolor
Sb03g041920
I
TCM_035160
Theobroma cacao
TCM_035160
I
TRAES3BF002300010CFD_g
Triticum aestivum
TRAES3BF002300010CFD_g
I
TRIUR3_14109
Triticum urartu
TRIUR3_14109
I
anac032
Vitis vinifera
VIT_18s0001g02300
I
GRMZM2G014653
Zea mays
GRMZM2G014653
I