Sakowv30008499m.g (Saccoglossus kowalevskii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Sakowv30008499m.g T048903_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASCL1
M04135_2.00 		Homo sapiens
NRCASSTGYN
NRCASSTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_HT-SELEX 		0.864 0.860
ASCL1
M08055_2.00 		Homo sapiens
NNRGCAGCTGSNN
NNSCAGCTGCYNN		 ChIP-seq
Mathelier et al.(2014)
MA1100.1 		0.864 0.860
ASCL1
M08730_2.00 		Homo sapiens
NNVCASCTGCYBYN
NRVRGCAGSTGBNN		 Misc
Kulakovskiy et al.(2013)
ASCL1_HUMAN.H11MO.0.A 		0.864 0.860
Ascl1
M08748_2.00 		Mus musculus
BHSCASCTGCYBBN
NVVRGCAGSTGSDV		 Misc
Kulakovskiy et al.(2013)
ASCL1_MOUSE.H11MO.0.A 		0.864 0.860
Ascl1
M09464_2.00 		Mus musculus
NVCABCTGBBNN
NNVVCAGVTGBN		 Misc
Heinz et al.(2010)
NeuralTubes-Ascl1_GSE55840 		0.864 0.860
ASCL1
M09855_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_01 		0.864 0.860
ASCL1
M09856_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_02 		0.864 0.860
ASCL1
M09857_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6 		0.864 0.860
ASCL1
M04136_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_Methyl-HT-SELEX 		0.864 0.860
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23918617_peptide bHLH 69 119

Links

Other bHLH family TFs
Other Saccoglossus kowalevskii TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006449 Ailuropoda melanoleuca ENSAMEG00000006449 I 0.864
ENSAMXG00000024858 Astyanax mexicanus ENSAMXG00000024858 I 0.849
ENSBTAP00000021592-D1 Bos grunniens ENSBTAP00000021592-D1 I 0.864
ASCL1 Bos taurus ENSBTAG00000016227 I 0.864
e_gw.302.11.1 Branchiostoma floridae e_gw.302.11.1 I 0.840
e_gw.59.47.1 Branchiostoma floridae e_gw.59.47.1 I 0.840
ASCL1 Callithrix jacchus ENSCJAG00000014345 I 0.864
ASCL1 Canis familiaris ENSCAFG00000007324 I 0.864
ASCL1 Cavia porcellus ENSCPOG00000020666 I 0.864
ENSCSAG00000018938 Chlorocebus sabaeus ENSCSAG00000018938 I 0.864
ascl1a Danio rerio ENSDARG00000038386 I 0.864
ascl1b Danio rerio ENSDARG00000101628 I 0.849
ASCL1 Dasypus novemcinctus ENSDNOG00000001616 I 0.864
ASCL1 Felis catus ENSFCAG00000008250 I 0.864
ENSGMOG00000009589 Gadus morhua ENSGMOG00000009589 I 0.849
ENSGMOG00000002268 Gadus morhua ENSGMOG00000002268 I 0.864
ascl1a Gasterosteus aculeatus ENSGACG00000020048 I 0.864
ascl1b Gasterosteus aculeatus ENSGACG00000011375 I 0.849
ASCL1 Gorilla gorilla ENSGGOG00000005479 I 0.864
ASCL1 Homo sapiens ENSG00000139352 D 0.864
ENSSTOG00000028420 Ictidomys tridecemlineatus ENSSTOG00000028420 I 0.864
ENSLACG00000001911 Latimeria chalumnae ENSLACG00000001911 I 0.864
ENSLACG00000010712 Latimeria chalumnae ENSLACG00000010712 I 0.884
ENSLOCG00000017318 Lepisosteus oculatus ENSLOCG00000017318 I 0.849
ENSP00000266744 Macaca fascicularis ENSP00000266744 I 0.864
ASCL1 Macaca mulatta ENSMMUG00000005747 I 0.864
ENSMEUG00000010370 Macropus eugenii ENSMEUG00000010370 I 0.864
ASCL1 Monodelphis domestica ENSMODG00000002347 I 0.864
Ascl1 Mus musculus ENSMUSG00000020052 D 0.864
ENSNLEG00000006410 Nomascus leucogenys ENSNLEG00000006410 I 0.864
Ogr07565 Ophisaurus gracilis Ogr07565 I 0.864
ENSONIG00000020440 Oreochromis niloticus ENSONIG00000020440 I 0.849
ENSONIG00000021219 Oreochromis niloticus ENSONIG00000021219 I 0.864
ASCL1 Ornithorhynchus anatinus ENSOANG00000013973 I 0.864
ASCL1 Oryctolagus cuniculus ENSOCUG00000006992 I 0.864
ascl1a Oryzias latipes ENSORLG00000016504 I 0.864
ascl1b Oryzias latipes ENSORLG00000012117 I 0.849
ASCL1 Otolemur garnettii ENSOGAG00000030324 I 0.864
ENSOARG00000015879 Ovis aries ENSOARG00000015879 I 0.864
ENSPFOG00000018073 Poecilia formosa ENSPFOG00000018073 I 0.864
ENSPFOG00000020633 Poecilia formosa ENSPFOG00000020633 I 0.849
Pvit_15764 Pogona vitticeps Pvit_15764 I 0.864
ENSPPYG00000004884 Pongo abelii ENSPPYG00000004884 I 0.864
ASCL1 Pteropus vampyrus ENSPVAG00000011272 I 0.864
Ascl1 Rattus norvegicus ENSRNOG00000004294 I 0.864
ENSSHAG00000011936 Sarcophilus harrisii ENSSHAG00000011936 I 0.864
SMAR011494 Strigamia maritima SMAR011494 I 0.864
SPU_028148 Strongylocentrotus purpuratus SPU_028148 I 0.894
ascl1b Takifugu rubripes ENSTRUG00000011651 I 0.849
ascl1a Takifugu rubripes ENSTRUG00000012801 I 0.864
ascl1b Tetraodon nigroviridis ENSTNIG00000011380 I 0.849
ASCL1 Tursiops truncatus ENSTTRG00000016243 I 0.864
ASCL1 Vicugna pacos ENSVPAG00000002018 I 0.864
ascl1.L Xenopus laevis XB-GENE-1032969 I 0.864
ascl1.S Xenopus laevis XB-GENE-17340658 I 0.864
ascl1 Xenopus tropicalis XB-GENE-1032967 I 0.864
ENSXMAG00000019890 Xiphophorus maculatus ENSXMAG00000019890 I 0.849
ENSXMAG00000019614 Xiphophorus maculatus ENSXMAG00000019614 I 0.864