CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.0578s0027
(
Capsella grandiflora
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cagra.0578s0027
T049213_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0578s0027.1.p
bHLH
75
127
KKLNHNASERDRRKKINSLFSTLRSCLPASNHSKKLSIPETVSRSLKYIPELQ
Links
Other
bHLH
family TFs
Other
Capsella grandiflora
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CERSUDRAFT_110988
Ceriporiopsis subvermispora
CERSUDRAFT_110988
N
GLOTRDRAFT_122008
Gloeophyllum trabeum
GLOTRDRAFT_122008
N
M413DRAFT_439142
Hebeloma cylindrosporum
M413DRAFT_439142
N
HETIRDRAFT_423957
Heterobasidion irregulare
HETIRDRAFT_423957
N
LACBIDRAFT_301157
Laccaria bicolor
LACBIDRAFT_301157
N
PILCRDRAFT_813808
Piloderma croceum
PILCRDRAFT_813808
N
PISMIDRAFT_644543
Pisolithus microcarpus
PISMIDRAFT_644543
N
M404DRAFT_23073
Pisolithus tinctorius
M404DRAFT_23073
N
SCHCODRAFT_73210
Schizophyllum commune
SCHCODRAFT_73210
N
SCLCIDRAFT_101475
Scleroderma citrinum
SCLCIDRAFT_101475
N
SERLA73DRAFT_80157
Serpula lacrymans
SERLA73DRAFT_80157
N