CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1659s0007
(
Capsella grandiflora
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cagra.1659s0007
T049260_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1659s0007.1.p
bHLH
28
77
KRVNKAVRERLKREHLNELFIELADTLELNQQNSGKASILCEATRFLKDV
Links
Other
bHLH
family TFs
Other
Capsella grandiflora
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PYE
Arabidopsis lyrata
fgenesh2_kg.5__1121__AT3G47640.1
N
0.914
BHLH47
Arabidopsis thaliana
AT3G47640
N
0.914
Bostr.18473s0193
Boechera stricta
Bostr.18473s0193
N
0.914
Carubv10017931m.g
Capsella rubella
Carubv10017931m.g
N
0.914
evm.TU.contig_30141.2
Carica papaya
evm.TU.contig_30141.2
N
0.858
Eucgr.B00470
Eucalyptus grandis
Eucgr.B00470
N
0.858
Thhalv10010670m.g
Eutrema salsugineum
Thhalv10010670m.g
N
0.914
Gorai.007G036700
Gossypium raimondii
Gorai.007G036700
N
0.839
Pm024772
Prunus mume
Pm024772
N
0.869
PRUPE_ppa010295mg
Prunus persica
PRUPE_ppa010295mg
N
0.869