Carubv10002337m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10002337m.g T049333_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10002337m bHLH 18 61

Links

Other bHLH family TFs
Other Capsella rubella TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N
BRADI2G38380 Brachypodium distachyon BRADI2G38380 N
PK07533.1 Cannabis sativa PK07533.1 I
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I
GLYMA11G12240 Glycine max GLYMA11G12240 I
GLYMA12G04440 Glycine max GLYMA12G04440 I
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I
MLOC_52125 Hordeum vulgare MLOC_52125 N
Lus10040428.g Linum usitatissimum Lus10040428.g I
MDP0000205823 Malus domestica MDP0000205823 I
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I
MTR_1g087040 Medicago truncatula MTR_1g087040 I
mgf018581m Mimulus guttatus mgf018581m I
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I
OBART05G02070 Oryza barthii OBART05G02070 N
OB05G12090 Oryza brachyantha OB05G12090 N
ORGLA05G0020300 Oryza glaberrima ORGLA05G0020300 N
OGLUM05G02130 Oryza glumaepatula OGLUM05G02130 N
BGIOSGA019118 Oryza indica BGIOSGA019118 I
BGIOSGA019116 Oryza indica BGIOSGA019116 N
OMERI05G02170 Oryza meridionalis OMERI05G02170 N
ONIVA05G02010 Oryza nivara ONIVA05G02010 I
OPUNC05G01750 Oryza punctata OPUNC05G01750 N
ORUFI05G02170 Oryza rufipogon ORUFI05G02170 N
Pavir.Ca00746 Panicum virgatum Pavir.Ca00746 N
Pavir.J06041 Panicum virgatum Pavir.J06041 N
Si023562m.g Setaria italica Si023562m.g N
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I
Traes_1DS_62FDD3493 Triticum aestivum Traes_1DS_62FDD3493 N
Traes_1BS_A44C97E0F Triticum aestivum Traes_1BS_A44C97E0F N
Traes_1AS_94B6230FB1 Triticum aestivum Traes_1AS_94B6230FB1 N
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I