evm.TU.supercontig_8.103 (Carica papaya)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 evm.TU.supercontig_8.103 T049799_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH78
M01713_2.00 		Arabidopsis thaliana
GCACGTGC
GCACGTGC		 PBM
Weirauch et al.(2014)
pTH7666 		0.914 0.980
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.901 0.900
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.901 0.900
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.888 0.960
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.888 0.940
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.875 0.920
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.875 0.900
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.875 0.900
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.875 0.900
PK05923.1
M01121_2.00 		Cannabis sativa
NNNNNNN
NNNNNNN		 PBM
Lambert et al.(2019)
pTH11368 		0.868 0.800
BEE2
M01708_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8094 		0.864 0.860
AT2G18300
M01702_2.00 		Arabidopsis thaliana
NBCACGTGCNNN
NNNGCACGTGVN		 PBM
Weirauch et al.(2014)
pTH7289 		0.864 0.840
AT2G18300
M06729_2.00 		Arabidopsis thaliana
ACTGGT
ACCAGT		 Dap-seq
OMalley et al.(2016)
bHLH64_col_a 		0.864 0.840
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_8.103 bHLH 362 411

Links

Other bHLH family TFs
Other Carica papaya TFs

884 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05299 Aegilops tauschii F775_05299 N
Ca_16486 Cicer arietinum Ca_16486 N
Cucsa.365420 Cucumis sativus Cucsa.365420 N
Gorai.009G086200 Gossypium raimondii Gorai.009G086200 N
MLOC_17690 Hordeum vulgare MLOC_17690 N
LPERR11G02850 Leersia perrieri LPERR11G02850 N
OBART11G03420 Oryza barthii OBART11G03420 N
OB11G12720 Oryza brachyantha OB11G12720 N
ORGLA11G0031300 Oryza glaberrima ORGLA11G0031300 N
OGLUM11G03040 Oryza glumaepatula OGLUM11G03040 N
OLONG_000706 Oryza longistaminata OLONG_000706 N
OMERI11G03130 Oryza meridionalis OMERI11G03130 N
ONIVA01G19020 Oryza nivara ONIVA01G19020 N
OPUNC11G03040 Oryza punctata OPUNC11G03040 N
ORUFI11G03300 Oryza rufipogon ORUFI11G03300 N
TGAL4 Oryza sativa OS11G0152700 N
Pavir.Ca00148 Panicum virgatum Pavir.Ca00148 N
Pavir.J34096 Panicum virgatum Pavir.J34096 N
Si026421m.g Setaria italica Si026421m.g N
Si014861m.g Setaria italica Si014861m.g N
Sb08g003260 Sorghum bicolor Sb08g003260 N
Traes_4AL_5E7F93445 Triticum aestivum Traes_4AL_5E7F93445 N
Traes_4BS_B7A8F8CD8 Triticum aestivum Traes_4BS_B7A8F8CD8 N
Traes_4DS_0521C8ABF Triticum aestivum Traes_4DS_0521C8ABF N