Pavir.Bb03409 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Bb03409 T050704_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb03409.1.p bHLH 47 97
Pavir.Bb03409.2.p bHLH 34 84
Pavir.Bb03409.3.p bHLH 34 84
Pavir.Bb03409.4.p bHLH 34 84
Pavir.Bb03409.5.p bHLH 34 84
Pavir.Bb03409.7.p bHLH 47 97
Pavir.Bb03409.9.p bHLH 47 97

Links

Other bHLH family TFs
Other Panicum virgatum TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G61110 Brachypodium distachyon BRADI1G61110 N 0.883
LPERR07G20030 Leersia perrieri LPERR07G20030 N 0.869
OBART07G23020 Oryza barthii OBART07G23020 N 0.893
OB07G28610 Oryza brachyantha OB07G28610 N 0.893
ORGLA07G0180200 Oryza glaberrima ORGLA07G0180200 N 0.893
OGLUM07G23080 Oryza glumaepatula OGLUM07G23080 N 0.893
BGIOSGA023869 Oryza indica BGIOSGA023869 N 0.893
OLONG_009586 Oryza longistaminata OLONG_009586 N 0.893
OMERI07G19420 Oryza meridionalis OMERI07G19420 N 0.893
ONIVA07G22640 Oryza nivara ONIVA07G22640 N 0.893
OPUNC07G21640 Oryza punctata OPUNC07G21640 N 0.893
OPUNC07G21720 Oryza punctata OPUNC07G21720 N 0.893
ORUFI07G24160 Oryza rufipogon ORUFI07G24160 N 0.893
BHLH062 Oryza sativa OS07G0628500 N 0.893
Pavir.Ba00364 Panicum virgatum Pavir.Ba00364 N 0.914
Pavir.Ia03149 Panicum virgatum Pavir.Ia03149 N 0.848
Pavir.J37675 Panicum virgatum Pavir.J37675 N 0.845
PDK_20s1715301g001 Phoenix dactylifera PDK_20s1715301g001 N 0.840
Si037016m.g Setaria italica Si037016m.g N 0.848
Sb02g040140 Sorghum bicolor Sb02g040140 N 0.914
GRMZM2G350312 Zea mays GRMZM2G350312 N 0.848
GRMZM2G017145 Zea mays GRMZM2G017145 N 0.914