LDEC009949 (Leptinotarsa decemlineata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 LDEC009949 T051509_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nau
M03600_2.00 		Drosophila melanogaster
DBAACAGCTGTYVH
DBRACAGCTGTTVH		 SELEX
Nitta et al.(2015)
nau_1 		0.863 0.846
nau
M03601_2.00 		Drosophila melanogaster
NBRACAGCTGACRC
GYGTCAGCTGTYVN		 SELEX
Nitta et al.(2015)
nau_2 		0.863 0.846
nau
M03602_2.00 		Drosophila melanogaster
RCGWCAGCTGWCGC
GCGWCAGCTGWCGY		 SELEX
Nitta et al.(2015)
nau_3 		0.863 0.846
nau
M05949_2.00 		Drosophila melanogaster
CACCTGYY
RRCAGGTG		 B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922 		0.863 0.846
nau
M05950_2.00 		Drosophila melanogaster
RACASCTGACGC
GCGTCAGSTGTY		 B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922 		0.863 0.846
hlh-1
M00746_2.00 		Caenorhabditis elegans
RACAGCTGNN
NNCAGCTGTY		 PBM
DeMasi et al.(2011)
HLH-1 		0.846 0.827
hlh-1
M00929_2.00 		Caenorhabditis elegans
GACAGCTG
CAGCTGTC		 PBM
Grove et al.(2009)
HLH1 		0.846 0.827
hlh-1
M08063_2.00 		Caenorhabditis elegans
VAACAGYTGNY
RNCARCTGTTB		 ChIP-seq
Mathelier et al.(2014)
MA0545.1 		0.846 0.827
hlh-1
M09481_2.00 		Caenorhabditis elegans
NNRNCARNTGNY
RNCANYTGNYNN		 Misc
Heinz et al.(2010)
cElegans-Embryo-HLH1_modEncode 		0.846 0.827
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC009949-PA bHLH 161 212

Links

Other bHLH family TFs
Other Leptinotarsa decemlineata TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07402 Aegilops tauschii F775_07402 N
MLOC_71830 Hordeum vulgare MLOC_71830 N
OGLUM09G20250 Oryza glumaepatula OGLUM09G20250 N
Pavir.Ba01498 Panicum virgatum Pavir.Ba01498 N
Sb02g032730 Sorghum bicolor Sb02g032730 N
Traes_5BL_DCE703499 Triticum aestivum Traes_5BL_DCE703499 N
GRMZM2G142150 Zea mays GRMZM2G142150 N