PK00939.1 (Cannabis sativa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 PK00939.1 T051552_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.914 1.000
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.890 0.896
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.890 0.896
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.890 0.896
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.890 0.875
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.890 0.875
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.882 0.625
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.875
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.843 0.500
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.625
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK00939.1 bHLH 358 405

Links

Other bHLH family TFs
Other Cannabis sativa TFs

672 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_160.24 Carica papaya evm.TU.supercontig_160.24 I 0.000
Ca_02249 Cicer arietinum Ca_02249 I 0.000
Ca_09203 Cicer arietinum Ca_09203 I 0.000
Cla014272 Citrullus lanatus Cla014272 I 0.000
Cla021213 Citrullus lanatus Cla021213 I 0.000
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.000
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.000
Cucsa.353120 Cucumis sativus Cucsa.353120 I 0.000
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.000
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.000
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.000
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.000
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.000
LPERR03G29970 Leersia perrieri LPERR03G29970 I 0.000
MDP0000124992 Malus domestica MDP0000124992 I 0.000
MDP0000786507 Malus domestica MDP0000786507 I 0.000
MDP0000262514 Malus domestica MDP0000262514 I 0.000
cassava46793.m1 Manihot esculenta cassava46793.m1 I 0.000
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.000
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.000
MTR_5g014990 Medicago truncatula MTR_5g014990 I 0.000
OBART03G35660 Oryza barthii OBART03G35660 I 0.000
OB03G42660 Oryza brachyantha OB03G42660 I 0.000
ORGLA03G0327000 Oryza glaberrima ORGLA03G0327000 I 0.000
OGLUM03G35410 Oryza glumaepatula OGLUM03G35410 I 0.000
BGIOSGA009746 Oryza indica BGIOSGA009746 I 0.000
OLONG_025560 Oryza longistaminata OLONG_025560 I 0.000
OMERI03G32880 Oryza meridionalis OMERI03G32880 I 0.000
OMERI02G33190 Oryza meridionalis OMERI02G33190 N 0.000
ONIVA03G37150 Oryza nivara ONIVA03G37150 I 0.000
ORUFI03G37090 Oryza rufipogon ORUFI03G37090 I 0.000
OS03G0771100 Oryza sativa OS03G0771100 I 0.000
Pavir.Ia00427 Panicum virgatum Pavir.Ia00427 I 0.000
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.000
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.000
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.000
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.000
Si036681m.g Setaria italica Si036681m.g I 0.000
Sb01g006800 Sorghum bicolor Sb01g006800 I 0.000
TCM_034634 Theobroma cacao TCM_034634 I 0.000
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.000
MYB36 Vitis vinifera VIT_11s0052g01490 I 0.000