SMU15011543 (Schmidtea mediterranea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMU15011543 T051689_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe22
M01729_2.00 		Mus musculus
NVCATATGGN
NCCATATGBN		 PBM
Weirauch et al.(2014)
pTH5267 		0.890 0.945
BHLHE22
M02804_2.00 		Homo sapiens
NAVCATATGBTN
NAVCATATGBTN		 SELEX
Jolma et al.(2013)
BHLHE22_1 		0.890 0.945
BHLHE23
M02784_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Jolma et al.(2013)
BHLHE23_1 		0.890 0.945
Oli
M03618_2.00 		Drosophila melanogaster
AMCATATGKY
RMCATATGKT		 SELEX
Nitta et al.(2015)
Oli_1 		0.890 0.945
BHLHE22
M04199_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_HT-SELEX 		0.890 0.945
BHLHE23
M04108_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_HT-SELEX 		0.890 0.945
BHLHE23
M04110_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_HT-SELEX 		0.890 0.945
Oli
M05985_2.00 		Drosophila melanogaster
SACCATATGKY
RMCATATGGTS		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_1_FBgn0032651 		0.890 0.945
Oli
M05986_2.00 		Drosophila melanogaster
AHSBNRCCATMTGKY
RMCAKATGGYNVSDT		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_2_FBgn0032651 		0.890 0.945
Oli
M05987_2.00 		Drosophila melanogaster
MCATCTGKY
RMCAGATGK		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_3_FBgn0032651 		0.890 0.945
BHLHE22
M04200_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_Methyl-HT-SELEX 		0.890 0.945
BHLHE23
M04109_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_Methyl-HT-SELEX 		0.890 0.945
BHLHE23
M04111_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_Methyl-HT-SELEX 		0.890 0.945
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15011543 bHLH 76 130

Links

Other bHLH family TFs
Other Schmidtea mediterranea TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02122 Aegilops tauschii F775_02122 I 0.000
AMTR_s00077p00103580 Amborella trichopoda AMTR_s00077p00103580 I 0.000
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.000
WRKY38 Arabidopsis thaliana AT5G22570 D 0.000
Bo01002s040 Brassica oleracea Bo01002s040 I 0.000
Bra002421 Brassica rapa Bra002421 I 0.000
PK03324.1 Cannabis sativa PK03324.1 I 0.000
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.000
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.000
Ca_18932 Cicer arietinum Ca_18932 I 0.000
Ca_12915 Cicer arietinum Ca_12915 I 0.000
Ca_09495 Cicer arietinum Ca_09495 I 0.000
Cla018337 Citrullus lanatus Cla018337 I 0.000
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.000
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.000
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.000
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.000
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.000
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.000
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.000
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.000
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.000
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.000
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.000
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.000
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.000
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.000
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.000
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.000
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.000
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.000
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.000
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.000
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.000
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.000
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.000
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.000
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.000
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.000
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.000
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.000
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.000
Pm003014 Prunus mume Pm003014 I 0.000
Pm003015 Prunus mume Pm003015 I 0.000
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.000
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.000
29915.m000479 Ricinus communis 29915.m000479 I 0.000
29729.m002369 Ricinus communis 29729.m002369 I 0.000
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.000
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.000
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.000
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.000
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.000
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.000
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.000
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.000