SMU15037660 (Schmidtea mediterranea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMU15037660 T051721_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Twist2
M01718_2.00 		Mus musculus
NACATATGKN
NMCATATGTN		 PBM
Weirauch et al.(2014)
pTH5033 		0.870 0.865
TWIST1
M08052_2.00 		Homo sapiens
NNNCCAGATGTNN
NNACATCTGGNNN		 ChIP-seq
Mathelier et al.(2014)
MA1123.1 		0.870 0.846
TWIST1
M08722_2.00 		Homo sapiens
WAATBRRWWMCAGATGB
VCATCTGKWWYYVATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_HUMAN.H11MO.0.A 		0.870 0.846
Twist1
M08766_2.00 		Mus musculus
WAATNRRWWMCAKMTGB
VCAKMTGKWWYYNATTW		 Misc
Kulakovskiy et al.(2013)
TWST1_MOUSE.H11MO.0.B 		0.870 0.846
TWIST1
M09831_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6_01 		0.870 0.846
TWIST1
M09832_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TWIST_Q6 		0.870 0.846
twi
M03605_2.00 		Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK		 SELEX
Nitta et al.(2015)
twi_1 		0.859 0.808
twi
M03606_2.00 		Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK		 SELEX
Nitta et al.(2015)
twi_2 		0.859 0.808
twi
M05955_2.00 		Drosophila melanogaster
VCCAGATGTB
VACATCTGGB		 B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900 		0.859 0.808
twi
M05956_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900 		0.859 0.808
twi
M07538_2.00 		Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN		 DNaseI footprinting
Mathelier et al.(2014)
MA0249.1 		0.859 0.808
twi
M09657_2.00 		Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT		 Misc
Kulakovskiy et al.(2009)
twi 		0.859 0.808
twi
M09892_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TWI_Q6 		0.859 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15037660 bHLH 90 141

Links

Other bHLH family TFs
Other Schmidtea mediterranea TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N
ASU_03038 Ascaris suum ASU_03038 N
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N
CBN15963 Caenorhabditis brenneri CBN15963 N
CBN18264 Caenorhabditis brenneri CBN18264 I
CBG17366 Caenorhabditis briggsae CBG17366 N
CBG04789 Caenorhabditis briggsae CBG04789 I
nhr-53 Caenorhabditis elegans WBGene00003643 I
CRE27175 Caenorhabditis remanei CRE27175 N
CRE27174 Caenorhabditis remanei CRE27174 I
CRE09011 Caenorhabditis remanei CRE09011 I
L889_g10781 Steinernema feltiae L889_g10781 I
L889_g9698 Steinernema feltiae L889_g9698 I
L889_g987 Steinernema feltiae L889_g987 I
L893_g4569 Steinernema glaseri L893_g4569 I
L898_g9580 Steinernema monticolum L898_g9580 I
L892_g8145 Steinernema scapterisci L892_g8145 I
TCNE_0001892601 Toxocara canis TCNE_0001892601 N