CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LLOJ003726
(
Lutzomyia longipalpis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
LLOJ003726
T053171_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Fer1
M03620_2.00
Drosophila melanogaster
VDCASCTGHY
RDCAGSTGHB
SELEX
Nitta et al.(2015)
Fer1_1
0.890
0.962
Fer1
M05990_2.00
Drosophila melanogaster
HVCASMTGWCV
BGWCAKSTGBD
B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475
0.890
0.962
Fer1
M05991_2.00
Drosophila melanogaster
WYRHCAGCTGACG
CGTCAGCTGDYRW
B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475
0.890
0.962
PTF1A
M04156_2.00
Homo sapiens
AACAGCTGACRB
VYGTCAGCTGTT
SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX
0.870
0.865
PTF1A
M08736_2.00
Homo sapiens
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B
0.870
0.865
Ptf1a
M08757_2.00
Mus musculus
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS
Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A
0.870
0.865
Ptf1a
M09470_2.00
Mus musculus
NVVCASSTGB
VCASSTGBBN
Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459
0.870
0.865
PTF1A
M04157_2.00
Homo sapiens
AMCAGCTGACRB
VYGTCAGCTGKT
SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX
0.870
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LLOJ003726-PA
bHLH
83
135
QRQAANLRERRRMQSINEAFEGLRSHIPTLPYEKRLSKVDTLKLAISYITFLG
Links
Other
bHLH
family TFs
Other
Lutzomyia longipalpis
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANAC13
Arabidopsis lyrata
fgenesh2_kg.1__3425__AT1G32870.2
I
0.000
ANAC13
Arabidopsis thaliana
AT1G32870
D
0.000
Bo7g057730
Brassica oleracea
Bo7g057730
I
0.000
Bra012342
Brassica rapa
Bra012342
I
0.000
Cagra.1443s0015
Capsella grandiflora
Cagra.1443s0015
I
0.000
Carubv10008817m.g
Capsella rubella
Carubv10008817m.g
I
0.000
evm.TU.supercontig_26.135
Carica papaya
evm.TU.supercontig_26.135
I
0.000
Cla013854
Citrullus lanatus
Cla013854
I
0.000
Thhalv10007369m.g
Eutrema salsugineum
Thhalv10007369m.g
I
0.000
Gorai.009G260000
Gossypium raimondii
Gorai.009G260000
I
0.000
MDP0000146969
Malus domestica
MDP0000146969
I
0.000
MDP0000169485
Malus domestica
MDP0000169485
I
0.000
MDP0000852271
Malus domestica
MDP0000852271
I
0.000
cassava22173.valid.m1
Manihot esculenta
cassava22173.valid.m1
I
0.000
mg018130m
Mimulus guttatus
mg018130m
I
0.000
POPTR_0005s22180
Populus trichocarpa
POPTR_0005s22180
I
0.000
POPTR_0002s06210
Populus trichocarpa
POPTR_0002s06210
I
0.000
SapurV1A.0134s0420
Salix purpurea
SapurV1A.0134s0420
I
0.000
SapurV1A.0348s0040
Salix purpurea
SapurV1A.0348s0040
I
0.000
Solyc12g056790.1
Solanum lycopersicum
Solyc12g056790.1
I
0.000
Solyc04g072220.2
Solanum lycopersicum
Solyc04g072220.2
I
0.000
PGSC0003DMG400031149
Solanum tuberosum
PGSC0003DMG400031149
I
0.000
TCM_036587
Theobroma cacao
TCM_036587
I
0.000
VIT_18s0001g01820
Vitis vinifera
VIT_18s0001g01820
I
0.000