CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LLOJ007342
(
Lutzomyia longipalpis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
LLOJ007342
T053188_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAND2
M04150_2.00
Homo sapiens
MACACCTGBD
HVCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_HT-SELEX
0.862
0.846
HAND2
M04151_2.00
Homo sapiens
MACACCTGYD
HRCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_Methyl-HT-SELEX
0.862
0.846
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LLOJ007342-PA
bHLH
105
157
RRNTANKKERRRTQSINSAFSYLRERIPNVPSDTKLSKIKTLRLATSYITYLT
Links
Other
bHLH
family TFs
Other
Lutzomyia longipalpis
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_29714
Aegilops tauschii
F775_29714
N
BRADI2G08600
Brachypodium distachyon
BRADI2G08600
N
LPERR01G08830
Leersia perrieri
LPERR01G08830
N
GSMUA_Achr10G15240_001
Musa acuminata
GSMUA_Achr10G15240_001
N
OBART01G09250
Oryza barthii
OBART01G09250
N
OB01G19360
Oryza brachyantha
OB01G19360
N
ORGLA01G0083700
Oryza glaberrima
ORGLA01G0083700
N
OGLUM01G10590
Oryza glumaepatula
OGLUM01G10590
N
BGIOSGA002005
Oryza indica
BGIOSGA002005
N
OMERI01G09230
Oryza meridionalis
OMERI01G09230
N
ONIVA01G11810
Oryza nivara
ONIVA01G11810
N
ORUFI01G10030
Oryza rufipogon
ORUFI01G10030
N
OS01G0246500
Oryza sativa
OS01G0246500
N
Pavir.J04809
Panicum virgatum
Pavir.J04809
N
Pavir.J24144
Panicum virgatum
Pavir.J24144
N
Si002505m.g
Setaria italica
Si002505m.g
N
Si036653m.g
Setaria italica
Si036653m.g
N
Sb03g000260
Sorghum bicolor
Sb03g000260
N
Traes_3AS_D1FC86E9B
Triticum aestivum
Traes_3AS_D1FC86E9B
N
TRAES3BF003800040CFD_g
Triticum aestivum
TRAES3BF003800040CFD_g
N
AC233880.1_FG006
Zea mays
AC233880.1_FG006
N