TRE_0001403601 (Trichobilharzia regenti)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 TRE_0001403601 T055342_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLHE23
M02784_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Jolma et al.(2013)
BHLHE23_1 		0.914 0.944
BHLHE23
M04108_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_HT-SELEX 		0.914 0.944
BHLHE23
M04110_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_HT-SELEX 		0.914 0.944
BHLHE23
M04109_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE23_eDBD_Methyl-HT-SELEX 		0.914 0.944
BHLHE23
M04111_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
BHLHE23_FL_Methyl-HT-SELEX 		0.914 0.944
Bhlhe22
M01729_2.00 		Mus musculus
NVCATATGGN
NCCATATGBN		 PBM
Weirauch et al.(2014)
pTH5267 		0.914 0.926
BHLHE22
M02804_2.00 		Homo sapiens
NAVCATATGBTN
NAVCATATGBTN		 SELEX
Jolma et al.(2013)
BHLHE22_1 		0.914 0.926
BHLHE22
M04199_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_HT-SELEX 		0.914 0.926
BHLHE22
M04200_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
BHLHE22_eDBD_Methyl-HT-SELEX 		0.914 0.926
Oli
M03618_2.00 		Drosophila melanogaster
AMCATATGKY
RMCATATGKT		 SELEX
Nitta et al.(2015)
Oli_1 		0.890 0.944
Oli
M05985_2.00 		Drosophila melanogaster
SACCATATGKY
RMCATATGGTS		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_1_FBgn0032651 		0.890 0.944
Oli
M05986_2.00 		Drosophila melanogaster
AHSBNRCCATMTGKY
RMCAKATGGYNVSDT		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_2_FBgn0032651 		0.890 0.944
Oli
M05987_2.00 		Drosophila melanogaster
MCATCTGKY
RMCAGATGK		 B1H
Zhu et al.(2011)
Oli_da_SANGER_5_3_FBgn0032651 		0.890 0.944
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0001403601-mRNA-1 bHLH 125 178

Links

Other bHLH family TFs
Other Trichobilharzia regenti TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB005452 Anopheles albimanus AALB005452 I 0.000
BGIBMGA011254 Bombyx mori BGIBMGA011254 I 0.000
CAGL0H02959g Candida glabrata CAGL0H02959g D 0.000
DACRYDRAFT_15039 Dacryopinax sp DACRYDRAFT_15039 I 0.000
KGM_17297 Danaus plexippus KGM_17297 I 0.000
DAPPUDRAFT_314795 Daphnia pulex DAPPUDRAFT_314795 I 0.000
CAD25867 Encephalitozoon cuniculi CAD25867 I 0.000
EHEL_101500 Encephalitozoon hellem EHEL_101500 I 0.000
Eint_101430 Encephalitozoon intestinalis Eint_101430 I 0.000
EROM_101370 Encephalitozoon romaleae EROM_101370 I 0.000
HMEL005588 Heliconius melpomene HMEL005588 I 0.000
LOAG_18791 Loa loa LOAG_18791 N 0.000
DI09_143p10 Microsporidia sp DI09_143p10 I 0.000
ML22078a Mnemiopsis leidyi ML22078a I 0.000
fgenesh1_pg.scaffold_2000153 Monosiga brevicollis fgenesh1_pg.scaffold_2000153 N 0.000
NEPG_00487 Nematocida parisii ertm1 NEPG_00487 I 0.000
tetur26g01270 Tetranychus urticae tetur26g01270 I 0.000
TriadG9468 Trichoplax adhaerens TriadG9468 I 0.000
PV09_04248 Verruconis gallopava PV09_04248 I 0.000
VICG_02118 Vittaforma corneae VICG_02118 I 0.000
meis1.S Xenopus laevis XB-GENE-479443 I 0.000