CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTRE_0000339201
(
Trichuris trichiura
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
TTRE_0000339201
T055957_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTRE_0000339201
Brinker
2
57
TRRSYKGGFKLEVVKIAKESNNAQAAKKYGVTLKVVIDWMSKEEALEKMPKKNAQD
Links
Other
Brinker
family TFs
Other
Trichuris trichiura
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI5G26100
Brachypodium distachyon
BRADI5G26100
N
MLOC_50915
Hordeum vulgare
MLOC_50915
N
LPERR02G09050
Leersia perrieri
LPERR02G09050
N
LPERR04G04010
Leersia perrieri
LPERR04G04010
N
OBART04G29550
Oryza barthii
OBART04G29550
N
OBART04G29560
Oryza barthii
OBART04G29560
N
OB04G36540
Oryza brachyantha
OB04G36540
N
ORGLA04G0258600
Oryza glaberrima
ORGLA04G0258600
N
ORGLA04G0258500
Oryza glaberrima
ORGLA04G0258500
N
ORGLA03G0402500
Oryza glaberrima
ORGLA03G0402500
N
OGLUM04G29460
Oryza glumaepatula
OGLUM04G29460
N
OGLUM04G29470
Oryza glumaepatula
OGLUM04G29470
N
BGIOSGA014094
Oryza indica
BGIOSGA014094
N
BGIOSGA014093
Oryza indica
BGIOSGA014093
N
OLONG_002774
Oryza longistaminata
OLONG_002774
N
OMERI04G24970
Oryza meridionalis
OMERI04G24970
N
OMERI04G24980
Oryza meridionalis
OMERI04G24980
N
ONIVA04G28090
Oryza nivara
ONIVA04G28090
N
OPUNC04G27120
Oryza punctata
OPUNC04G27120
N
OPUNC04G27110
Oryza punctata
OPUNC04G27110
N
ORUFI04G31260
Oryza rufipogon
ORUFI04G31260
N
OS04G0676600
Oryza sativa
OS04G0676600
N
OS04G0676650
Oryza sativa
OS04G0676650
N
Traes_2AL_B518C11E4
Triticum aestivum
Traes_2AL_B518C11E4
N
TRIUR3_23520
Triticum urartu
TRIUR3_23520
N