CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTRE_0000838301
(
Trichuris trichiura
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
TTRE_0000838301
T055961_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTRE_0000838301
Brinker
2
52
KRKSYTAGFKLEVVKVAKESNNAQAARKYGVTRKMVIDWRKQEEALKKMPK
Links
Other
Brinker
family TFs
Other
Trichuris trichiura
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_025840
Albugo laibachii
ALNC14_025840
N
estExt_fgenesh1_kg.C_30353
Phytophthora capsici
estExt_fgenesh1_kg.C_30353
N
fgenesh_scip_prom.46568.6018
Phytophthora kernoviae
fgenesh_scip_prom.46568.6018
N
F443_05458
Phytophthora parasitica
F443_05458
N
Phyra72995
Phytophthora ramorum
Phyra72995
N
Phyra80034
Phytophthora ramorum
Phyra80034
N
Physo128716
Phytophthora sojae
Physo128716
N
maker-pag1_scaffold_423-snap-gene-0.16
Pythium aphanidermatum
maker-pag1_scaffold_423-snap-gene-0.16
N
maker-par_contig_1307-fgenesh-gene-0.1
Pythium arrhenomanes
maker-par_contig_1307-fgenesh-gene-0.1
N
fgenesh_masked-pir_contig_3-abinit-gene-1.85
Pythium irregulare
fgenesh_masked-pir_contig_3-abinit-gene-1.85
N
maker-piw_contig_849-snap-gene-0.12
Pythium iwayamai
maker-piw_contig_849-snap-gene-0.12
N
PYU1_G009435
Pythium ultimum
PYU1_G009435
N
maker-pve_contig_624-fgenesh-gene-0.7
Pythium vexans
maker-pve_contig_624-fgenesh-gene-0.7
N