AMTR_s00059p00094730 (Amborella trichopoda)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AMTR_s00059p00094730 T056757_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.884 0.672
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.884 0.672
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.857 0.641
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.857 0.641
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.845 0.734
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.845 0.734
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.845 0.734
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.845 0.734
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.845 0.734
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.833 0.625
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.821 0.688
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.821 0.688
CPRF3_PETCR
M10071_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_01 		0.820 0.625
CPRF3_PETCR
M10072_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_Q2 		0.820 0.625
EmBP-1
M02659_2.00 		Triticum aestivum
CCACGTSW
WSACGTGG		 SELEX
Mathelier et al.(2014)
MA0128.1 		0.816 0.641
EMBP1_WHEAT
M09921_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_02 		0.816 0.641
EMBP1_WHEAT
M09922_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_Q2 		0.816 0.641
CPRF1_PETCR
M10066_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_01 		0.811 0.672
CPRF1_PETCR
M10067_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_Q2 		0.811 0.672
CPRF1_PETCR
M10068_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF_Q2 		0.811 0.672
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.802 0.625
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.801 0.656
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.798 0.688
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.790 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN17524 bZIP 281 344

Links

Other bZIP family TFs
Other Amborella trichopoda TFs

304 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.000
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.000
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.000
CBN28290 Caenorhabditis brenneri CBN28290 I 0.000
CBN23838 Caenorhabditis brenneri CBN23838 I 0.000
CBN21486 Caenorhabditis brenneri CBN21486 I 0.000
CBG06609 Caenorhabditis briggsae CBG06609 I 0.000
CBG20729 Caenorhabditis briggsae CBG20729 I 0.000
CBG22870 Caenorhabditis briggsae CBG22870 I 0.000
CBG06599 Caenorhabditis briggsae CBG06599 I 0.000
CBG09567 Caenorhabditis briggsae CBG09567 I 0.000
CBG20727 Caenorhabditis briggsae CBG20727 I 0.000
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.000
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.000
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.000
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.000
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.000
CJA09697 Caenorhabditis japonica CJA09697 I 0.000
CRE30948 Caenorhabditis remanei CRE30948 I 0.000
CRE15675 Caenorhabditis remanei CRE15675 I 0.000
CRE15644 Caenorhabditis remanei CRE15644 I 0.000
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.000
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.000
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.000
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.000
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.000
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.000
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.000
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.000
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.000
Minc14668 Meloidogyne incognita Minc14668 I 0.000
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.000
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.000
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.000
L889_g6696 Steinernema feltiae L889_g6696 I 0.000
L898_g12798 Steinernema monticolum L898_g12798 I 0.000
L898_g3512 Steinernema monticolum L898_g3512 I 0.000
L898_g4018 Steinernema monticolum L898_g4018 N 0.000
L892_g14834 Steinernema scapterisci L892_g14834 N 0.000
L892_g2782 Steinernema scapterisci L892_g2782 I 0.000
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.000