Bra001671 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra001671 T057397_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HYH
M01132_2.00 		Arabidopsis thaliana
NNWSACGTGDNN
NNHCACGTSWNN		 PBM
Lambert et al.(2019)
pTH9959 		0.859 0.969
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra001671.1-P bZIP 78 141

Links

Other bZIP family TFs
Other Brassica rapa TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I
Bra020620 Brassica rapa Bra020620 I
PK05128.1 Cannabis sativa PK05128.1 D
PK11472.1 Cannabis sativa PK11472.1 I
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I
Ca_03753 Cicer arietinum Ca_03753 I
Cla015037 Citrullus lanatus Cla015037 I
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I
Cucsa.388800 Cucumis sativus Cucsa.388800 I
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I
GLYMA19G43420 Glycine max GLYMA19G43420 I
GLYMA03G40730 Glycine max GLYMA03G40730 I
Gorai.004G075400 Gossypium raimondii Gorai.004G075400 I
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I
Gorai.007G141500 Gossypium raimondii Gorai.007G141500 I
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I
Gorai.004G218300 Gossypium raimondii Gorai.004G218300 I
LPERR02G04950 Leersia perrieri LPERR02G04950 I
LPERR06G19690 Leersia perrieri LPERR06G19690 I
Lus10015913.g Linum usitatissimum Lus10015913.g I
Lus10006590.g Linum usitatissimum Lus10006590.g I
MDP0000176747 Malus domestica MDP0000176747 I
MDP0000270365 Malus domestica MDP0000270365 I
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I
cassava18833.valid.m1 Manihot esculenta cassava18833.valid.m1 I
cassava36728.valid.m1 Manihot esculenta cassava36728.valid.m1 N
mgf012838m Mimulus guttatus mgf012838m I
mgf009803m Mimulus guttatus mgf009803m I
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I
OBART02G11580 Oryza barthii OBART02G11580 I
OBART02G05680 Oryza barthii OBART02G05680 I
OB06G31430 Oryza brachyantha OB06G31430 I
ORGLA06G0198800 Oryza glaberrima ORGLA06G0198800 I
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I
BGIOSGA006734 Oryza indica BGIOSGA006734 I
BGIOSGA007649 Oryza indica BGIOSGA007649 I
BGIOSGA020738 Oryza indica BGIOSGA020738 I
BGIOSGA020743 Oryza indica BGIOSGA020743 I
OMERI06G23650 Oryza meridionalis OMERI06G23650 I
OMERI02G12230 Oryza meridionalis OMERI02G12230 I
OMERI02G06470 Oryza meridionalis OMERI02G06470 I
ONIVA06G27820 Oryza nivara ONIVA06G27820 I
ONIVA02G12920 Oryza nivara ONIVA02G12920 I
ONIVA02G06040 Oryza nivara ONIVA02G06040 I
OPUNC06G21410 Oryza punctata OPUNC06G21410 I
OPUNC02G10230 Oryza punctata OPUNC02G10230 I
ORUFI06G25410 Oryza rufipogon ORUFI06G25410 I
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I
OS02G0266800 Oryza sativa OS02G0266800 D
OS02G0175100 Oryza sativa OS02G0175100 I
OS06G0662200 Oryza sativa OS06G0662200 I
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I
POPTR_0002s04660 Populus trichocarpa POPTR_0002s04660 I
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I
Pm020231 Prunus mume Pm020231 I
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I
29883.m001986 Ricinus communis 29883.m001986 I
29598.m000468 Ricinus communis 29598.m000468 I
SapurV1A.2969s0020 Salix purpurea SapurV1A.2969s0020 N
SapurV1A.0860s0020 Salix purpurea SapurV1A.0860s0020 N
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I
SapurV1A.0006s1330 Salix purpurea SapurV1A.0006s1330 I
Si017778m.g Setaria italica Si017778m.g I
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I
Sb04g005020 Sorghum bicolor Sb04g005020 I
TCM_004222 Theobroma cacao TCM_004222 I
TCM_026349 Theobroma cacao TCM_026349 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I
GRMZM2G098904 Zea mays GRMZM2G098904 I