Bra018800 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra018800 T057462_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.814 0.758
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.814 0.758
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.792 0.677
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.792 0.677
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.792 0.677
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.792 0.677
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.792 0.677
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.792 0.677
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.790 0.581
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.789 0.565
ABF2
M01771_2.00 		Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN		 PBM
Weirauch et al.(2014)
pTH8103 		0.785 0.548
ABF2
M06755_2.00 		Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN		 Dap-seq
OMalley et al.(2016)
ABF2_col_v3a 		0.785 0.548
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra018800.1-P bZIP 287 349

Links

Other bZIP family TFs
Other Brassica rapa TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI47146 Acyrthosiphon pisum ACYPI47146 N 0.000
AAEL003097 Aedes aegypti AAEL003097 N 0.000
ENSAMEG00000006258 Ailuropoda melanoleuca ENSAMEG00000006258 N 0.000
Alligator_sinensis_CCG015084.1 Alligator sinensis Alligator_sinensis_CCG015084.1 N 0.000
AALB004109 Anopheles albimanus AALB004109 N 0.000
AARA007796 Anopheles arabiensis AARA007796 N 0.000
AATE013496 Anopheles atroparvus AATE013496 N 0.000
ACHR000042 Anopheles christyi ACHR000042 N 0.000
ACOM025306 Anopheles coluzzii ACOM025306 N 0.000
ADAC004139 Anopheles darlingi ADAC004139 N 0.000
ADIR008028 Anopheles dirus ADIR008028 N 0.000
AEPI000476 Anopheles epiroticus AEPI000476 N 0.000
AFAF008223 Anopheles farauti AFAF008223 N 0.000
AFUN008052 Anopheles funestus AFUN008052 N 0.000
AGAP007133 Anopheles gambiae AGAP007133 N 0.000
AMAM009687 Anopheles maculatus AMAM009687 N 0.000
AMEC009276 Anopheles melas AMEC009276 N 0.000
AMEM004763 Anopheles merus AMEM004763 N 0.000
AMIN011274 Anopheles minimus AMIN011274 N 0.000
AQUA002064 Anopheles quadriannulatus AQUA002064 N 0.000
ASTEI06908 Anopheles stephensi ASTEI06908 N 0.000
Afo_R003276 Aptenodytes forsteri Afo_R003276 N 0.000
ENSAMXG00000003636 Astyanax mexicanus ENSAMXG00000003636 N 0.000
ENSAMXG00000013350 Astyanax mexicanus ENSAMXG00000013350 N 0.000
ENSAMXG00000020082 Astyanax mexicanus ENSAMXG00000020082 N 0.000
ACEP21389 Atta cephalotes ACEP21389 N 0.000
ENSBTAP00000011330-D1 Bos grunniens ENSBTAP00000011330-D1 N 0.000
ENSP00000306522-D1 Bos grunniens ENSP00000306522-D1 N 0.000
CAMTA2 Bos taurus ENSBTAG00000008591 N 0.000
e_gw.96.31.1 Branchiostoma floridae e_gw.96.31.1 N 0.000
fgenesh2_pg.scaffold_96000095 Branchiostoma floridae fgenesh2_pg.scaffold_96000095 N 0.000
CAMTA2 Callithrix jacchus ENSCJAG00000011609 N 0.000
Aan_R005984 Calypte anna Aan_R005984 N 0.000
CAMTA2 Canis familiaris ENSCAFG00000015674 N 0.000
CAMTA1 Canis familiaris ENSCAFG00000019650 N 0.000
CapteG124203 Capitella teleta CapteG124203 N 0.000
CAMTA2 Cavia porcellus ENSCPOG00000007319 N 0.000
CAMTA1 Cavia porcellus ENSCPOG00000014759 N 0.000
ENSCSAG00000012903 Chlorocebus sabaeus ENSCSAG00000012903 N 0.000
CGI_10022084 Crassostrea gigas CGI_10022084 N 0.000
CpipJ_CPIJ003689 Culex pipiens CpipJ_CPIJ003689 N 0.000
CPIJ003689 Culex quinquefasciatus CPIJ003689 N 0.000
KGM_18441 Danaus plexippus KGM_18441 N 0.000
camta1b Danio rerio ENSDARG00000007824 N 0.000
camta1a Danio rerio ENSDARG00000077428 N 0.000
camta2 Danio rerio ENSDARG00000092799 N 0.000
DAPPUDRAFT_312030 Daphnia pulex DAPPUDRAFT_312030 N 0.000
CAMTA2 Dasypus novemcinctus ENSDNOG00000036357 N 0.000
YQE_00136 Dendroctonus ponderosae YQE_00136 N 0.000
Camta1 Dipodomys ordii ENSDORG00000003017 N 0.000
Camta2 Dipodomys ordii ENSDORG00000011763 N 0.000
Camta Drosophila melanogaster FBgn0259234 N 0.000
GA30460 Drosophila pseudoobscura FBgn0264597 N 0.000
GD10658 Drosophila simulans FBgn0182425 N 0.000
CAMTA1 Echinops telfairi ENSETEG00000006373 N 0.000
CAMTA2 Equus caballus ENSECAG00000019370 N 0.000
CAMTA1 Equus caballus ENSECAG00000020792 N 0.000
CAMTA2 Felis catus ENSFCAG00000008698 N 0.000
ENSFCAG00000022960 Felis catus ENSFCAG00000022960 N 0.000
ENSFALG00000009834 Ficedula albicollis ENSFALG00000009834 N 0.000
ENSGMOG00000017650 Gadus morhua ENSGMOG00000017650 N 0.000
ENSGMOG00000019408 Gadus morhua ENSGMOG00000019408 N 0.000
ENSGALG00000000610 Gallus gallus ENSGALG00000000610 N 0.000
ENSGACG00000001106 Gasterosteus aculeatus ENSGACG00000001106 N 0.000
camta1b Gasterosteus aculeatus ENSGACG00000007914 N 0.000
Gfo_R002636 Geospiza fortis Gfo_R002636 N 0.000
CAMTA1 Gorilla gorilla ENSGGOG00000003577 N 0.000
CAMTA2 Gorilla gorilla ENSGGOG00000009188 N 0.000
Hsal_08954--XP_001120489.1_APIME Harpegnathos saltator Hsal_08954--XP_001120489.1_APIME N 0.000
CAMTA2 Homo sapiens ENSG00000108509 N 0.000
CAMTA1 Homo sapiens ENSG00000171735 N 0.000
ENSSTOG00000003897 Ictidomys tridecemlineatus ENSSTOG00000003897 N 0.000
ENSSTOG00000011183 Ictidomys tridecemlineatus ENSSTOG00000011183 N 0.000
ISCW018640 Ixodes scapularis ISCW018640 N 0.000
ISCW018642 Ixodes scapularis ISCW018642 N 0.000
ENSLACG00000014089 Latimeria chalumnae ENSLACG00000014089 N 0.000
ENSLACG00000014574 Latimeria chalumnae ENSLACG00000014574 N 0.000
ENSLOCG00000013712 Lepisosteus oculatus ENSLOCG00000013712 N 0.000
CAMTA2 Loxodonta africana ENSLAFG00000012042 N 0.000
LCUP001199 Lucilia cuprina LCUP001199 N 0.000
ENSP00000321813 Macaca fascicularis ENSP00000321813 N 0.000
CAMTA2 Macaca mulatta ENSMMUG00000009176 N 0.000
ENSMEUG00000007952 Macropus eugenii ENSMEUG00000007952 N 0.000
CAMTA2 Microcebus murinus ENSMICG00000012537 N 0.000
CAMTA2 Monodelphis domestica ENSMODG00000005219 N 0.000
ENSMODG00000005842 Monodelphis domestica ENSMODG00000005842 N 0.000
MDOA011429 Musca domestica MDOA011429 N 0.000
ENSMPUG00000006733 Mustela putorius furo ENSMPUG00000006733 N 0.000
ENSMPUG00000011010 Mustela putorius furo ENSMPUG00000011010 N 0.000
Camta1 Mus musculus ENSMUSG00000014592 N 0.000
Camta2 Mus musculus ENSMUSG00000040712 N 0.000
Myotis_brandtii_CAMTA2_10007480 Myotis brandtii Myotis_brandtii_CAMTA2_10007480 N 0.000
CAMTA2 Myotis lucifugus ENSMLUG00000014019 N 0.000
ENSNLEG00000008706 Nomascus leucogenys ENSNLEG00000008706 N 0.000
ENSNLEG00000017452 Nomascus leucogenys ENSNLEG00000017452 N 0.000
CAMTA1 Ochotona princeps ENSOPRG00000015968 N 0.000
Ocbimv22002350m.g Octopus bimaculoides Ocbimv22002350m.g N 0.000
Ogr01933 Ophisaurus gracilis Ogr01933 N 0.000
ENSONIG00000004505 Oreochromis niloticus ENSONIG00000004505 N 0.000
ENSONIG00000019368 Oreochromis niloticus ENSONIG00000019368 N 0.000
ENSOANG00000030450 Ornithorhynchus anatinus ENSOANG00000030450 N 0.000
CAMTA2 Oryctolagus cuniculus ENSOCUG00000001109 N 0.000
camta1b Oryzias latipes ENSORLG00000016337 N 0.000
CAMTA1 Otolemur garnettii ENSOGAG00000009792 N 0.000
CAMTA2 Otolemur garnettii ENSOGAG00000014734 N 0.000
ENSOARG00000004897 Ovis aries ENSOARG00000004897 N 0.000
CAMTA1 Pan troglodytes ENSPTRG00000000096 N 0.000
CAMTA2 Pan troglodytes ENSPTRG00000023129 N 0.000
ENSPANG00000024316 Papio anubis ENSPANG00000024316 N 0.000
PHUM466620 Pediculus humanus PHUM466620 N 0.000
ENSPSIG00000004616 Pelodiscus sinensis ENSPSIG00000004616 N 0.000
PPAI004941 Phlebotomus papatasi PPAI004941 N 0.000
ENSPFOG00000000859 Poecilia formosa ENSPFOG00000000859 N 0.000
ENSPFOG00000004225 Poecilia formosa ENSPFOG00000004225 N 0.000
ENSPFOG00000016244 Poecilia formosa ENSPFOG00000016244 N 0.000
Pvit_07906 Pogona vitticeps Pvit_07906 N 0.000
ENSPPYG00000001932 Pongo abelii ENSPPYG00000001932 N 0.000
ENSPPYG00000007853 Pongo abelii ENSPPYG00000007853 N 0.000
CAMTA2 Pteropus vampyrus ENSPVAG00000003768 N 0.000
CAMTA1 Pteropus vampyrus ENSPVAG00000005390 N 0.000
Camta2 Rattus norvegicus ENSRNOG00000004283 N 0.000
RPRC011455 Rhodnius prolixus RPRC011455 N 0.000
Sakowv30004245m.g Saccoglossus kowalevskii Sakowv30004245m.g N 0.000
ENSSHAG00000006160 Sarcophilus harrisii ENSSHAG00000006160 N 0.000
CAMTA2 Sorex araneus ENSSARG00000004137 N 0.000
SMAR001697 Strigamia maritima SMAR001697 N 0.000
CAMTA2 Sus scrofa ENSSSCG00000017902 N 0.000
CAMTA1 Taeniopygia guttata ENSTGUG00000002566 N 0.000
ENSTRUG00000000888 Takifugu rubripes ENSTRUG00000000888 N 0.000
camta1b Takifugu rubripes ENSTRUG00000010941 N 0.000
camta1a Takifugu rubripes ENSTRUG00000013622 N 0.000
ENSTSYG00000007714 Tarsius syrichta ENSTSYG00000007714 N 0.000
ENSTNIG00000001909 Tetraodon nigroviridis ENSTNIG00000001909 N 0.000
ENSTNIG00000003621 Tetraodon nigroviridis ENSTNIG00000003621 N 0.000
ENSTNIG00000012546 Tetraodon nigroviridis ENSTNIG00000012546 N 0.000
TC012001 Tribolium castaneum TC012001 N 0.000
CAMTA1 Tupaia belangeri ENSTBEG00000001406 N 0.000
CAMTA2 Tupaia belangeri ENSTBEG00000003130 N 0.000
CAMTA2 Tursiops truncatus ENSTTRG00000001303 N 0.000
CAMTA1 Tursiops truncatus ENSTTRG00000010366 N 0.000
camta2 Xenopus tropicalis XB-GENE-1033052 N 0.000
XP_002933905 Xenopus tropicalis XP_002933905 N 0.000
ENSXMAG00000001955 Xiphophorus maculatus ENSXMAG00000001955 N 0.000
ENSXMAG00000018742 Xiphophorus maculatus ENSXMAG00000018742 N 0.000
L798_01998 Zootermopsis nevadensis L798_01998 N 0.000