CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra019436
(
Brassica rapa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bra019436
T057463_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK24205.1
M01161_2.00
Cannabis sativa
NCACGTGKCN
NGMCACGTGN
PBM
Lambert et al.(2019)
pTH10152
0.792
0.559
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra019436.1-P
bZIP
262
320
MERRQRRMIKNRESAARSRARRQAYTVELELELNQLTEENMKLKKIVVMNRSTQITKEK
Links
Other
bZIP
family TFs
Other
Brassica rapa
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DPBF2
Arabidopsis lyrata
fgenesh2_kg.5__854__AT3G44460.1
I
0.821
DPBF2
Arabidopsis thaliana
AT3G44460
I
0.821
Bostr.0556s0737
Boechera stricta
Bostr.0556s0737
I
0.821
BRADI2G55550
Brachypodium distachyon
BRADI2G55550
I
0.814
Bo3g122120
Brassica oleracea
Bo3g122120
I
0.821
PK24205.1
Cannabis sativa
PK24205.1
D
0.792
Cagra.2192s0012
Capsella grandiflora
Cagra.2192s0012
I
0.821
Carubv10019243m.g
Capsella rubella
Carubv10019243m.g
I
0.821
Ca_19689
Cicer arietinum
Ca_19689
I
0.783
Thhalv10011159m.g
Eutrema salsugineum
Thhalv10011159m.g
I
0.807
Gorai.013G258300
Gossypium raimondii
Gorai.013G258300
I
0.795
Lus10043386.g
Linum usitatissimum
Lus10043386.g
I
0.783
GSMUA_Achr10G00420_001
Musa acuminata
GSMUA_Achr10G00420_001
I
0.782