CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI4G32090
(
Brachypodium distachyon
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
BRADI4G32090
T057614_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN
NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.799
0.797
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH
DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.799
0.797
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN
NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.792
0.712
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT
ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.787
0.627
ABF3
M09912_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.787
0.627
OS08G0471950
M10047_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.786
0.712
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.784
0.729
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.784
0.729
ABF4
M09911_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.784
0.729
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI4G32090.1
bZIP
278
336
VERRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKELNQKLEREQAEIMEMQKNEDV
Links
Other
bZIP
family TFs
Other
Brachypodium distachyon
TFs
174 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g03521
Acanthocheilonema viteae
nAv.1.0.1.g03521
I
0.000
AAEL003436
Aedes aegypti
AAEL003436
I
0.000
ENSAMEG00000000326
Ailuropoda melanoleuca
ENSAMEG00000000326
I
0.000
ENSAMEG00000006442
Ailuropoda melanoleuca
ENSAMEG00000006442
I
0.000
ENSAMEG00000011229
Ailuropoda melanoleuca
ENSAMEG00000011229
I
0.000
Alligator_sinensis_CCG006299.1
Alligator sinensis
Alligator_sinensis_CCG006299.1
I
0.000
ENSAPLG00000009260
Anas platyrhynchos
ENSAPLG00000009260
I
0.000
EBF3
Anolis carolinensis
ENSACAG00000008590
I
0.000
AGAP011437
Anopheles gambiae
AGAP011437
I
0.000
GB42304
Apis mellifera
GB42304
I
0.000
Afo_R003215
Aptenodytes forsteri
Afo_R003215
I
0.000
ASU_01180
Ascaris suum
ASU_01180
I
0.000
ENSAMXG00000003402
Astyanax mexicanus
ENSAMXG00000003402
I
0.000
ENSAMXG00000006585
Astyanax mexicanus
ENSAMXG00000006585
I
0.000
ENSBTAP00000042518-D1
Bos grunniens
ENSBTAP00000042518-D1
I
0.000
ENSP00000347463-D1
Bos grunniens
ENSP00000347463-D1
I
0.000
EBF1
Bos taurus
ENSBTAG00000037508
I
0.000
EBF4
Bos taurus
ENSBTAG00000037757
I
0.000
EBF2
Bos taurus
ENSBTAG00000040390
I
0.000
Bm6296
Brugia malayi
Bm6296
I
0.000
BXY_1639700
Bursaphelenchus xylophilus
BXY_1639700
I
0.000
CBN13270
Caenorhabditis brenneri
CBN13270
I
0.000
CBG07590
Caenorhabditis briggsae
CBG07590
I
0.000
CRE15310
Caenorhabditis remanei
CRE15310
I
0.000
EBF3
Callithrix jacchus
ENSCJAG00000014357
I
0.000
EBF1
Callithrix jacchus
ENSCJAG00000019016
I
0.000
EBF2
Callithrix jacchus
ENSCJAG00000019921
I
0.000
EBF4
Callithrix jacchus
ENSCJAG00000021027
I
0.000
Aan_R007097
Calypte anna
Aan_R007097
I
0.000
Aan_R009520
Calypte anna
Aan_R009520
I
0.000
EBF4
Canis familiaris
ENSCAFG00000006631
I
0.000
EBF2
Canis familiaris
ENSCAFG00000008918
I
0.000
EBF1
Canis familiaris
ENSCAFG00000017318
I
0.000
CapteG93575
Capitella teleta
CapteG93575
I
0.000
EBF2
Cavia porcellus
ENSCPOG00000001463
I
0.000
EBF4
Cavia porcellus
ENSCPOG00000004862
I
0.000
EBF3
Cavia porcellus
ENSCPOG00000005096
I
0.000
EBF1
Cavia porcellus
ENSCPOG00000026184
I
0.000
Cmyd_10020950
Chelonia mydas
Cmyd_10020950
I
0.000
ENSCSAG00000010974
Chlorocebus sabaeus
ENSCSAG00000010974
I
0.000
ENSCING00000003209
Ciona intestinalis
ENSCING00000003209
I
0.000
ENSCSAVG00000000458
Ciona savignyi
ENSCSAVG00000000458
I
0.000
csin100403
Clonorchis sinensis
csin100403
N
0.000
CGI_10023990
Crassostrea gigas
CGI_10023990
I
0.000
KGM_09934
Danaus plexippus
KGM_09934
I
0.000
ebf2
Danio rerio
ENSDARG00000042525
I
0.000
ebf1b
Danio rerio
ENSDARG00000069196
I
0.000
ebf3b
Danio rerio
ENSDARG00000091287
I
0.000
ebf1a
Danio rerio
ENSDARG00000099849
I
0.000
ebf3a
Danio rerio
ENSDARG00000100244
I
0.000
DAPPUDRAFT_22285
Daphnia pulex
DAPPUDRAFT_22285
I
0.000
EBF2
Dasypus novemcinctus
ENSDNOG00000040488
I
0.000
DICVIV_13258
Dictyocaulus viviparus
DICVIV_13258
I
0.000
nDi.2.2.2.g04990
Dirofilaria immitis
nDi.2.2.2.g04990
I
0.000
DME_0000265301
Dracunculus medinensis
DME_0000265301
I
0.000
GF11778
Drosophila ananassae
FBgn0088818
I
0.000
GG22397
Drosophila erecta
FBgn0114569
I
0.000
GH20479
Drosophila grimshawi
FBgn0127942
I
0.000
kn
Drosophila melanogaster
FBgn0001319
D
0.000
GI21022
Drosophila mojavensis
FBgn0143754
I
0.000
GL10656
Drosophila persimilis
FBgn0148266
I
0.000
GA24435
Drosophila pseudoobscura
FBgn0245832
I
0.000
GM20182
Drosophila sechellia
FBgn0175065
I
0.000
GJ21945
Drosophila virilis
FBgn0209060
I
0.000
GK23295
Drosophila willistoni
FBgn0225257
I
0.000
GE12286
Drosophila yakuba
FBgn0230042
I
0.000
ECANG7_02766
Echinococcus canadensis
ECANG7_02766
I
0.000
EBF1
Echinops telfairi
ENSETEG00000011711
I
0.000
EBF4
Equus caballus
ENSECAG00000010003
I
0.000
EBF2
Equus caballus
ENSECAG00000014179
I
0.000
EBF2
Felis catus
ENSFCAG00000003607
I
0.000
EBF1
Felis catus
ENSFCAG00000008547
I
0.000
ENSFALG00000001212
Ficedula albicollis
ENSFALG00000001212
I
0.000
ENSFALG00000008502
Ficedula albicollis
ENSFALG00000008502
I
0.000
ENSFALG00000011234
Ficedula albicollis
ENSFALG00000011234
I
0.000
ENSGMOG00000015541
Gadus morhua
ENSGMOG00000015541
I
0.000
ENSGMOG00000016636
Gadus morhua
ENSGMOG00000016636
I
0.000
EBF2
Gallus gallus
ENSGALG00000000242
I
0.000
EBF1
Gallus gallus
ENSGALG00000003699
I
0.000
ebf2
Gasterosteus aculeatus
ENSGACG00000008451
I
0.000
ebf3a
Gasterosteus aculeatus
ENSGACG00000009548
I
0.000
ENSGACG00000010053
Gasterosteus aculeatus
ENSGACG00000010053
I
0.000
EBF1
Gasterosteus aculeatus
ENSGACG00000018450
I
0.000
EBF1
Gasterosteus aculeatus
ENSGACG00000020458
I
0.000
Gfo_R004859
Geospiza fortis
Gfo_R004859
I
0.000
GPLIN_000159400
Globodera pallida
GPLIN_000159400
I
0.000
EBF1
Gorilla gorilla
ENSGGOG00000000033
I
0.000
EBF2
Gorilla gorilla
ENSGGOG00000001585
I
0.000
EBF4
Gorilla gorilla
ENSGGOG00000015503
I
0.000
HCOI01630600
Haemonchus contortus
HCOI01630600
I
0.000
HPLM_0000807901
Haemonchus placei
HPLM_0000807901
I
0.000
HelroG112029
Helobdella robusta
HelroG112029
I
0.000
EBF4
Homo sapiens
ENSG00000088881
D
0.000
EBF3
Homo sapiens
ENSG00000108001
D
0.000
EBF1
Homo sapiens
ENSG00000164330
D
0.000
EBF2
Homo sapiens
ENSG00000221818
D
0.000
TTAC_0000009401
Hydatigera taeniaeformis
TTAC_0000009401
I
0.000
HDID_0000285701
Hymenolepis diminuta
HDID_0000285701
I
0.000
HmN_000631100
Hymenolepis microstoma
HmN_000631100
I
0.000
ENSSTOG00000006113
Ictidomys tridecemlineatus
ENSSTOG00000006113
I
0.000
ENSLACG00000017271
Latimeria chalumnae
ENSLACG00000017271
I
0.000
ENSLOCG00000001693
Lepisosteus oculatus
ENSLOCG00000001693
I
0.000
ENSLOCG00000007615
Lepisosteus oculatus
ENSLOCG00000007615
I
0.000
ENSLOCG00000009282
Lepisosteus oculatus
ENSLOCG00000009282
I
0.000
ENSLOCG00000015225
Lepisosteus oculatus
ENSLOCG00000015225
I
0.000
nLs.2.1.2.g08363
Litomosoides sigmodontis
nLs.2.1.2.g08363
I
0.000
LOAG_18199
Loa loa
LOAG_18199
I
0.000
LotgiG225788
Lottia gigantea
LotgiG225788
I
0.000
EBF1
Loxodonta africana
ENSLAFG00000017522
I
0.000
EBF2
Loxodonta africana
ENSLAFG00000022465
I
0.000
ENSP00000347463
Macaca fascicularis
ENSP00000347463
I
0.000
ENSP00000405003
Macaca fascicularis
ENSP00000405003
I
0.000
EBF3
Macaca mulatta
ENSMMUG00000011447
I
0.000
EBF4
Macaca mulatta
ENSMMUG00000021331
I
0.000
EBF2
Meleagris gallopavo
ENSMGAG00000000791
I
0.000
MCOS_0000276101
Mesocestoides corti
MCOS_0000276101
I
0.000
EBF3
Microcebus murinus
ENSMICG00000008536
I
0.000
EBF1
Microcebus murinus
ENSMICG00000010036
I
0.000
EBF4
Monodelphis domestica
ENSMODG00000005256
I
0.000
EBF1
Monodelphis domestica
ENSMODG00000008198
I
0.000
MDOA011385
Musca domestica
MDOA011385
I
0.000
ENSMPUG00000003195
Mustela putorius furo
ENSMPUG00000003195
I
0.000
ENSMPUG00000009093
Mustela putorius furo
ENSMPUG00000009093
I
0.000
Ebf3
Mus musculus
ENSMUSG00000010476
I
0.000
Ebf2
Mus musculus
ENSMUSG00000022053
D
0.000
Ebf4
Mus musculus
ENSMUSG00000053552
D
0.000
Ebf1
Mus musculus
ENSMUSG00000057098
D
0.000
Myotis_brandtii_EBF4_10032372
Myotis brandtii
Myotis_brandtii_EBF4_10032372
I
0.000
EBF2
Myotis lucifugus
ENSMLUG00000011509
I
0.000
EBF4
Myotis lucifugus
ENSMLUG00000023832
I
0.000
NV10306
Nasonia vitripennis
NV10306
I
0.000
NECAME_10162
Necator americanus
NECAME_10162
I
0.000
NEMVEDRAFT_v1g164975
Nematostella vectensis
NEMVEDRAFT_v1g164975
N
0.000
ENSNLEG00000009110
Nomascus leucogenys
ENSNLEG00000009110
I
0.000
ENSNLEG00000016189
Nomascus leucogenys
ENSNLEG00000016189
I
0.000
EBF4
Ochotona princeps
ENSOPRG00000013703
I
0.000
SNAPOd2T00017027001
Oikopleura dioica
SNAPOd2T00017027001
I
0.000
WBGene00240610
Onchocerca volvulus
WBGene00240610
I
0.000
T265_13606
Opisthorchis viverrini
T265_13606
N
0.000
ENSONIG00000000451
Oreochromis niloticus
ENSONIG00000000451
I
0.000
ENSONIG00000004376
Oreochromis niloticus
ENSONIG00000004376
I
0.000
ENSONIG00000008631
Oreochromis niloticus
ENSONIG00000008631
I
0.000
ENSONIG00000013342
Oreochromis niloticus
ENSONIG00000013342
I
0.000
ENSONIG00000017655
Oreochromis niloticus
ENSONIG00000017655
I
0.000
ENSONIG00000019141
Oreochromis niloticus
ENSONIG00000019141
I
0.000
EBF1
Ornithorhynchus anatinus
ENSOANG00000012338
I
0.000
EBF1
Oryctolagus cuniculus
ENSOCUG00000008985
I
0.000
EBF2
Oryctolagus cuniculus
ENSOCUG00000011972
I
0.000
EBF1
Oryzias latipes
ENSORLG00000002342
I
0.000
ebf3a
Oryzias latipes
ENSORLG00000005870
I
0.000
ebf2
Oryzias latipes
ENSORLG00000006408
I
0.000
EBF1
Oryzias latipes
ENSORLG00000007471
I
0.000
EBF4
Oryzias latipes
ENSORLG00000020414
I
0.000
EBF4
Otolemur garnettii
ENSOGAG00000004688
I
0.000
EBF3
Otolemur garnettii
ENSOGAG00000007572
I
0.000
EBF2
Otolemur garnettii
ENSOGAG00000010783
I
0.000
ENSOARG00000005967
Ovis aries
ENSOARG00000005967
I
0.000
ENSOARG00000009825
Ovis aries
ENSOARG00000009825
I
0.000
EBF2
Pan troglodytes
ENSPTRG00000003058
I
0.000
EBF1
Pan troglodytes
ENSPTRG00000017477
I
0.000
ENSPANG00000020188
Papio anubis
ENSPANG00000020188
I
0.000
ENSPANG00000020231
Papio anubis
ENSPANG00000020231
I
0.000
PTRK_0001642500
Parastrongyloides trichosuri
PTRK_0001642500
I
0.000
PHUM119360
Pediculus humanus
PHUM119360
I
0.000
ENSPSIG00000016691
Pelodiscus sinensis
ENSPSIG00000016691
I
0.000
ENSPSIG00000016837
Pelodiscus sinensis
ENSPSIG00000016837
I
0.000
ENSPFOG00000000294
Poecilia formosa
ENSPFOG00000000294
I
0.000
ENSPFOG00000002559
Poecilia formosa
ENSPFOG00000002559
I
0.000
ENSPFOG00000007531
Poecilia formosa
ENSPFOG00000007531
I
0.000
ENSPFOG00000009617
Poecilia formosa
ENSPFOG00000009617
I
0.000
ENSPFOG00000017183
Poecilia formosa
ENSPFOG00000017183
I
0.000
Pvit_16838
Pogona vitticeps
Pvit_16838
I
0.000
ENSPPYG00000002766
Pongo abelii
ENSPPYG00000002766
I
0.000
ENSPPYG00000010836
Pongo abelii
ENSPPYG00000010836
I
0.000
ENSPPYG00000015995
Pongo abelii
ENSPPYG00000015995
I
0.000
ENSPPYG00000018454
Pongo abelii
ENSPPYG00000018454
I
0.000
EBF4
Pteropus vampyrus
ENSPVAG00000006830
I
0.000
EBF2
Pteropus vampyrus
ENSPVAG00000024254
I
0.000
Ebf4
Rattus norvegicus
ENSRNOG00000007408
I
0.000
Ebf2
Rattus norvegicus
ENSRNOG00000011548
I
0.000
Ebf3
Rattus norvegicus
ENSRNOG00000016102
I
0.000
Ebf1
Rattus norvegicus
ENSRNOG00000028845
I
0.000
RSKR_0000832900
Rhabditophanes kr3021
RSKR_0000832900
I
0.000
nRc.2.0.1.g06532
Romanomermis culicivorax
nRc.2.0.1.g06532
I
0.000
ENSSHAG00000017239
Sarcophilus harrisii
ENSSHAG00000017239
I
0.000
SMU15024001
Schmidtea mediterranea
SMU15024001
I
0.000
L596_g20342
Steinernema carpocapsae
L596_g20342
I
0.000
L889_g1820
Steinernema feltiae
L889_g1820
I
0.000
L893_g31120
Steinernema glaseri
L893_g31120
I
0.000
L898_g8304
Steinernema monticolum
L898_g8304
I
0.000
SPU_004702
Strongylocentrotus purpuratus
SPU_004702
I
0.000
SPAL_0001132500
Strongyloides papillosus
SPAL_0001132500
I
0.000
SSTP_0000472000
Strongyloides stercoralis
SSTP_0000472000
I
0.000
SVE_0119400
Strongyloides venezuelensis
SVE_0119400
I
0.000
SVUK_0001114801
Strongylus vulgaris
SVUK_0001114801
I
0.000
EBF4
Sus scrofa
ENSSSCG00000007171
I
0.000
EBF2
Sus scrofa
ENSSSCG00000009655
I
0.000
ENSSSCG00000010757
Sus scrofa
ENSSSCG00000010757
I
0.000
EBF1
Taeniopygia guttata
ENSTGUG00000000593
I
0.000
EBF2
Taeniopygia guttata
ENSTGUG00000004267
I
0.000
EBF3
Taeniopygia guttata
ENSTGUG00000011600
I
0.000
ebf3a
Takifugu rubripes
ENSTRUG00000005721
I
0.000
EBF1
Takifugu rubripes
ENSTRUG00000009320
I
0.000
ebf2
Takifugu rubripes
ENSTRUG00000011528
I
0.000
EBF1
Takifugu rubripes
ENSTRUG00000013805
I
0.000
ENSTSYG00000019489
Tarsius syrichta
ENSTSYG00000019489
I
0.000
ebf2
Tetraodon nigroviridis
ENSTNIG00000015845
I
0.000
EBF1
Tetraodon nigroviridis
ENSTNIG00000016148
I
0.000
TCLT_0000613901
Thelazia callipaeda
TCLT_0000613901
I
0.000
TC001270
Tribolium castaneum
TC001270
I
0.000
D917_06660
Trichinella nativa
D917_06660
I
0.000
EFV50386
Trichinella spiralis
EFV50386
I
0.000
TTRE_0000372001
Trichuris trichiura
TTRE_0000372001
I
0.000
EBF3
Tupaia belangeri
ENSTBEG00000005858
I
0.000
EBF1
Tupaia belangeri
ENSTBEG00000007800
I
0.000
EBF4
Tursiops truncatus
ENSTTRG00000003459
I
0.000
EBF3
Tursiops truncatus
ENSTTRG00000014010
I
0.000
WUBG_00630
Wuchereria bancrofti
WUBG_00630
I
0.000
ebf2.L
Xenopus laevis
XB-GENE-6252857
I
0.000
ebf3.L
Xenopus laevis
XB-GENE-962547
I
0.000
ebf2.S
Xenopus laevis
XB-GENE-971141
I
0.000
ebf4
Xenopus tropicalis
XB-GENE-6030626
I
0.000
ebf3
Xenopus tropicalis
XB-GENE-962543
I
0.000
ebf2
Xenopus tropicalis
XB-GENE-971136
I
0.000
ENSXMAG00000000489
Xiphophorus maculatus
ENSXMAG00000000489
I
0.000
ENSXMAG00000006633
Xiphophorus maculatus
ENSXMAG00000006633
I
0.000
ENSXMAG00000010668
Xiphophorus maculatus
ENSXMAG00000010668
I
0.000
ENSXMAG00000012715
Xiphophorus maculatus
ENSXMAG00000012715
I
0.000
ENSXMAG00000017859
Xiphophorus maculatus
ENSXMAG00000017859
I
0.000
L798_15574
Zootermopsis nevadensis
L798_15574
I
0.000