ATF1 (Callithrix jacchus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSCJAG00000021155 T059246_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF1
M08792_2.00 		Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD		 Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B 		0.906 1.000
ATF1
M09485_2.00 		Homo sapiens
NVTGACGTMA
TKACGTCABN		 Misc
Heinz et al.(2010)
K562-ATF1_GSE31477 		0.906 1.000
ATF1
M09956_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q3 		0.906 1.000
ATF1
M09957_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6_01 		0.906 1.000
ATF1
M09958_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF1_Q6 		0.906 1.000
Atf1
M00124_2.00 		Mus musculus
NNNNDNDNNN
NNNHNHNNNN		 PBM
Badis et al.(2009)
Atf1_3026 		0.896 0.967
Atf1
M01804_2.00 		Mus musculus
RTGACGTV
BACGTCAY		 PBM
Weirauch et al.(2014)
pTH5005 		0.896 0.967
Atf1
M08820_2.00 		Mus musculus
VTGACGTSAV
BTSACGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B 		0.896 0.967
Creb1
M00992_2.00 		Mus musculus
NNTGACGTCV
BGACGTCANN		 PBM
Mann et al.(2013)
CREB1_UM_HK 		0.894 0.867
Creb1
M01806_2.00 		Mus musculus
VTKACGHNN
NNDCGTMAB		 PBM
Weirauch et al.(2014)
pTH5080 		0.894 0.867
CREB1
M04264_2.00 		Homo sapiens
NVTKACGTMABN
NVTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX 		0.894 0.867
CREB1
M04258_2.00 		Homo sapiens
NVTKACGTMANN
NNTKACGTMABN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1 		0.894 0.867
CREB1
M04259_2.00 		Homo sapiens
NRTGACGTR
YACGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2 		0.894 0.867
CREB1
M04260_2.00 		Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB		 SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3 		0.894 0.867
CREB1
M04022_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1 		0.894 0.867
CREB1
M04023_2.00 		Homo sapiens
RTGACGTADB
VHTACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2 		0.894 0.867
CREB1
M08066_2.00 		Homo sapiens
NVTGACGTCABN
NVTGACGTCABN		 ChIP-seq
Mathelier et al.(2014)
MA0018.3 		0.894 0.867
CREB1
M08791_2.00 		Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A 		0.894 0.867
Creb1
M08824_2.00 		Mus musculus
WKRCGTCAYYN
NRRTGACGYMW		 Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A 		0.894 0.867
CREB1
M09948_2.00 		Homo sapiens
TGACGTMW
WKACGTCA		 Transfac
Matys et al.(2006)
V$CREB_01 		0.894 0.867
CREB1
M09949_2.00 		Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV		 Transfac
Matys et al.(2006)
V$CREB_02 		0.894 0.867
CREB1
M09950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q3 		0.894 0.867
CREB1
M09951_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREB1_Q6 		0.894 0.867
CREB1
M09952_2.00 		Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q2 		0.894 0.867
CREB1
M09953_2.00 		Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV		 Transfac
Matys et al.(2006)
V$CREB_Q4 		0.894 0.867
CREB1
M09954_2.00 		Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM		 Transfac
Matys et al.(2006)
V$TAXCREB_01 		0.894 0.867
CREB1
M09955_2.00 		Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY		 Transfac
Matys et al.(2006)
V$TAXCREB_02 		0.894 0.867
Creb1
M00991_2.00 		Mus musculus
NNRTGACGYVN
NBRCGTCAYNN		 PBM
Mann et al.(2013)
CREB1_M_HK 		0.894 0.867
CREB1
M04265_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX 		0.894 0.867
CREB1
M04261_2.00 		Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1 		0.894 0.867
CREB1
M04262_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2 		0.894 0.867
CREB1
M04263_2.00 		Homo sapiens
NRTGACGYV
BRCGTCAYN		 SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3 		0.894 0.867
Crem
M01821_2.00 		Mus musculus
NRTKACGTMN
NKACGTMAYN		 PBM
Weirauch et al.(2014)
pTH5002 		0.880 0.850
Crem
M08845_2.00 		Mus musculus
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C 		0.880 0.850
CREM
M04229_2.00 		Homo sapiens
VVTBACGTVABN
NVTBACGTVABB		 SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX 		0.849 0.750
CREM
M08784_2.00 		Homo sapiens
SVVTGACGTSA
TSACGTCABBS		 Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C 		0.849 0.750
CREM
M09930_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6_01 		0.849 0.750
CREM
M09931_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CREM_Q6 		0.849 0.750
CREM
M04230_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX 		0.849 0.750
CrebB-17A
M03659_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_1 		0.817 0.800
CrebB-17A
M03660_2.00 		Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY		 SELEX
Nitta et al.(2015)
CrebB-17A_2 		0.817 0.800
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000039381 bZIP 210 269

Links

Other bZIP family TFs
Other Callithrix jacchus TFs

360 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_037_00132 Aquilegia coerulea Aquca_037_00132 I
fgenesh2_kg.2__42__AT1G64380.1 Arabidopsis lyrata fgenesh2_kg.2__42__AT1G64380.1 I
ERF061 Arabidopsis thaliana AT1G64380 I
Bostr.29223s0053 Boechera stricta Bostr.29223s0053 I
BRADI2G15847 Brachypodium distachyon BRADI2G15847 N
BRADI5G16450 Brachypodium distachyon BRADI5G16450 I
Cagra.0062s0002 Capsella grandiflora Cagra.0062s0002 I
Carubv10020622m.g Capsella rubella Carubv10020622m.g I
evm.TU.supercontig_79.43 Carica papaya evm.TU.supercontig_79.43 I
Cla011559 Citrullus lanatus Cla011559 I
Cla011093 Citrullus lanatus Cla011093 I
Ciclev10021265m.g Citrus clementina Ciclev10021265m.g I
orange1.1g045091m.g Citrus sinensis orange1.1g045091m.g I
Cucsa.303840 Cucumis sativus Cucsa.303840 I
Eucgr.D01731 Eucalyptus grandis Eucgr.D01731 I
Eucgr.E00857 Eucalyptus grandis Eucgr.E00857 I
Thhalv10023588m.g Eutrema salsugineum Thhalv10023588m.g I
gene32084-v1.0-hybrid Fragaria vesca gene32084-v1.0-hybrid I
GLYMA01G43450 Glycine max GLYMA01G43450 I
GLYMA11G02050 Glycine max GLYMA11G02050 I
Gorai.012G130600 Gossypium raimondii Gorai.012G130600 I
Gorai.008G253900 Gossypium raimondii Gorai.008G253900 I
Gorai.007G026200 Gossypium raimondii Gorai.007G026200 N
Gorai.006G207800 Gossypium raimondii Gorai.006G207800 I
MLOC_53577 Hordeum vulgare MLOC_53577 N
LPERR05G22130 Leersia perrieri LPERR05G22130 N
Lus10001898.g Linum usitatissimum Lus10001898.g I
Lus10003889.g Linum usitatissimum Lus10003889.g I
chr2.CM0060.390.nc Lotus japonicus chr2.CM0060.390.nc I
MDP0000292965 Malus domestica MDP0000292965 I
MDP0000861708 Malus domestica MDP0000861708 I
mgf016403m Mimulus guttatus mgf016403m I
mgf021167m Mimulus guttatus mgf021167m I
GSMUA_Achr1G27990_001 Musa acuminata GSMUA_Achr1G27990_001 N
GSMUA_Achr1G00070_001 Musa acuminata GSMUA_Achr1G00070_001 I
ORGLA05G0229700 Oryza glaberrima ORGLA05G0229700 N
ORGLA03G0412600 Oryza glaberrima ORGLA03G0412600 N
OGLUM05G28130 Oryza glumaepatula OGLUM05G28130 N
BGIOSGA017525 Oryza indica BGIOSGA017525 N
ONIVA05G28560 Oryza nivara ONIVA05G28560 N
OPUNC05G24070 Oryza punctata OPUNC05G24070 N
ORUFI05G28440 Oryza rufipogon ORUFI05G28440 N
OS05G0572000 Oryza sativa OS05G0572000 N
Pavir.J10163 Panicum virgatum Pavir.J10163 N
Pavir.Gb00710 Panicum virgatum Pavir.Gb00710 I
Pavir.Ga00913 Panicum virgatum Pavir.Ga00913 I
POPTR_0001s10540 Populus trichocarpa POPTR_0001s10540 I
Pm024053 Prunus mume Pm024053 I
PRUPE_ppa009005mg Prunus persica PRUPE_ppa009005mg I
30190.m010825 Ricinus communis 30190.m010825 I
SapurV1A.0035s0570 Salix purpurea SapurV1A.0035s0570 I
SapurV1A.0237s0310 Salix purpurea SapurV1A.0237s0310 I
Si012169m.g Setaria italica Si012169m.g I
Sb06g023313 Sorghum bicolor Sb06g023313 I
Sb09g029070 Sorghum bicolor Sb09g029070 N
VIT_19s0014g03180 Vitis vinifera VIT_19s0014g03180 I
GRMZM5G846057 Zea mays GRMZM5G846057 I
GRMZM2G100982 Zea mays GRMZM2G100982 I
GRMZM2G026926 Zea mays GRMZM2G026926 I