CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BATF
(
Loxodonta africana
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSLAFG00000011315
T060046_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Batf
M08829_2.00
Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN
Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A
0.875
0.953
Batf
M09495_2.00
Mus musculus
VTGASTCABH
DVTGASTCAB
Misc
Heinz et al.(2010)
Th17-BATF_GSE39756
0.875
0.953
BATF
M04307_2.00
Homo sapiens
NVVYGMCACN
NGTGKCRBBN
SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX
0.864
0.953
BATF
M07821_2.00
Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA
ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha
0.864
0.953
BATF
M08799_2.00
Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN
Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A
0.864
0.953
BATF
M09971_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_01
0.864
0.953
BATF
M09972_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_02
0.864
0.953
BATF
M09973_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_03
0.864
0.953
BATF
M09974_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF_04
0.864
0.953
BATF
M04308_2.00
Homo sapiens
NVVYGACACN
NGTGTCRBBN
SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX
0.864
0.953
BATF3
M02833_2.00
Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR
SELEX
Jolma et al.(2013)
BATF3_1
0.825
0.641
BATF3
M04268_2.00
Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV
SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX
0.825
0.641
BATF3
M04270_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX
0.825
0.641
BATF3
M04025_2.00
Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1
0.825
0.641
BATF3
M04026_2.00
Homo sapiens
GRTGACGTGGS
SCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2
0.825
0.641
BATF3
M08794_2.00
Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B
0.825
0.641
BATF3
M09962_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BATF3_02
0.825
0.641
BATF3
M04269_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX
0.825
0.641
BATF3
M04271_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX
0.825
0.641
Batf3
M08826_2.00
Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN
Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A
0.823
0.609
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000009457
bZIP
24
87
SDDVRKVQRREKNRIAAQKSRQRQTQKADTLHLESEDLEKQNAALRKEIKKLTEEMKYFTSVLN
Links
Other
bZIP
family TFs
Other
Loxodonta africana
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL003978
Aedes aegypti
AAEL003978
I
AALB005349
Anopheles albimanus
AALB005349
I
AATE004981
Anopheles atroparvus
AATE004981
I
ACOM027947
Anopheles coluzzii
ACOM027947
I
ACUA018690
Anopheles culicifacies
ACUA018690
I
ADAC007927
Anopheles darlingi
ADAC007927
I
AFAF000519
Anopheles farauti
AFAF000519
I
AFUN000435
Anopheles funestus
AFUN000435
I
AGAP005390
Anopheles gambiae
AGAP005390
I
AMAM014424
Anopheles maculatus
AMAM014424
I
AMEC006310
Anopheles melas
AMEC006310
I
AMEM010751
Anopheles merus
AMEM010751
I
AMIN007420
Anopheles minimus
AMIN007420
I
AQUA007695
Anopheles quadriannulatus
AQUA007695
I
GB42492
Apis mellifera
GB42492
I
ACEP27778
Atta cephalotes
ACEP27778
I
BGLB003738
Biomphalaria glabrata
BGLB003738
I
e_gw.6.95.1
Branchiostoma floridae
e_gw.6.95.1
I
CapteG19364
Capitella teleta
CapteG19364
I
CGI_10005451
Crassostrea gigas
CGI_10005451
I
CpipJ_CPIJ005455
Culex pipiens
CpipJ_CPIJ005455
I
CPIJ005455
Culex quinquefasciatus
CPIJ005455
I
DAPPUDRAFT_53927
Daphnia pulex
DAPPUDRAFT_53927
I
YQE_07798
Dendroctonus ponderosae
YQE_07798
I
GF25038
Drosophila ananassae
FBgn0102030
I
GG14656
Drosophila erecta
FBgn0106912
I
GH15211
Drosophila grimshawi
FBgn0122686
I
Kah
Drosophila melanogaster
FBgn0035144
D
GI16731
Drosophila mojavensis
FBgn0139479
I
GA14370
Drosophila pseudoobscura
FBgn0074398
I
GM14272
Drosophila sechellia
FBgn0169198
I
GJ12475
Drosophila virilis
FBgn0199717
I
GK17557
Drosophila willistoni
FBgn0219556
I
GE21016
Drosophila yakuba
FBgn0238298
I
HelroG68814
Helobdella robusta
HelroG68814
N
LDEC013204
Leptinotarsa decemlineata
LDEC013204
I
LCUP006416
Lucilia cuprina
LCUP006416
I
MDOA000347
Musca domestica
MDOA000347
I
NV16451
Nasonia vitripennis
NV16451
I
Ocbimv22026834m.g
Octopus bimaculoides
Ocbimv22026834m.g
I
PHUM530390
Pediculus humanus
PHUM530390
I
RPRC007744
Rhodnius prolixus
RPRC007744
N
SINV14822
Solenopsis invicta
SINV14822
I
SPU_015640
Strongylocentrotus purpuratus
SPU_015640
I
tetur14g01820
Tetranychus urticae
tetur14g01820
I
TC002803
Tribolium castaneum
TC002803
I
L798_08219
Zootermopsis nevadensis
L798_08219
I