POPTR_0004s21360 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0004s21360 T066949_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA9
M01053_2.00 		Arabidopsis thaliana
NNNMTGACGTHN
NDACGTCAKNNN		 PBM
Sullivan et al.(2014)
pTH9788 		0.788 0.940
TGA9
M06748_2.00 		Arabidopsis thaliana
RTGACGTCAKC
GMTGACGTCAY		 Dap-seq
OMalley et al.(2016)
TGA9_col_a 		0.788 0.940
TGA9
M06749_2.00 		Arabidopsis thaliana
TKACGTCAKCD
HGMTGACGTMA		 Dap-seq
OMalley et al.(2016)
TGA9_colamp_a 		0.788 0.940
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s21360.1 bZIP 185 236

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.000
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.000
Pavir.Ea01343 Panicum virgatum Pavir.Ea01343 I 0.000
Pavir.Eb01225 Panicum virgatum Pavir.Eb01225 N 0.000
29889.m003258 Ricinus communis 29889.m003258 I 0.000
Si002107m.g Setaria italica Si002107m.g I 0.000
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.000
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.000