Si006889m.g (Setaria italica)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Si006889m.g T067979_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.805 0.742
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.805 0.742
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.797 0.661
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.796 0.597
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.796 0.597
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.796 0.597
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.790 0.581
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.790 0.581
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.790 0.581
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.790 0.581
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.790 0.581
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.790 0.581
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.786 0.613
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si006889m bZIP 243 314

Links

Other bZIP family TFs
Other Setaria italica TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G37795 Brachypodium distachyon BRADI2G37795 N 0.000
Pavir.J35278 Panicum virgatum Pavir.J35278 N 0.000
Pavir.J32630 Panicum virgatum Pavir.J32630 N 0.000
Pavir.J07161 Panicum virgatum Pavir.J07161 N 0.000
Pavir.J01563 Panicum virgatum Pavir.J01563 N 0.000
Pavir.Ia02192 Panicum virgatum Pavir.Ia02192 N 0.000
Pavir.Ga01170 Panicum virgatum Pavir.Ga01170 N 0.000
Pavir.Ea01242 Panicum virgatum Pavir.Ea01242 N 0.000
Pavir.Db01105 Panicum virgatum Pavir.Db01105 N 0.000
Pavir.Cb01092 Panicum virgatum Pavir.Cb01092 N 0.000
Sb01g016055 Sorghum bicolor Sb01g016055 N 0.000
Sb08g002650 Sorghum bicolor Sb08g002650 N 0.000
Sb05g007130 Sorghum bicolor Sb05g007130 N 0.000
Sb03g047180 Sorghum bicolor Sb03g047180 N 0.000
Sb03g031563 Sorghum bicolor Sb03g031563 N 0.000
Sb03g011600 Sorghum bicolor Sb03g011600 N 0.000
Sb02g028930 Sorghum bicolor Sb02g028930 N 0.000
Sb02g027384 Sorghum bicolor Sb02g027384 N 0.000
Sb02g007217 Sorghum bicolor Sb02g007217 N 0.000
Sb02g005860 Sorghum bicolor Sb02g005860 N 0.000
Sb02g005850 Sorghum bicolor Sb02g005850 N 0.000
Sb01g017605 Sorghum bicolor Sb01g017605 N 0.000
Traes_2DL_F37E51175 Triticum aestivum Traes_2DL_F37E51175 N 0.000
Traes_5BL_FC8AB1380 Triticum aestivum Traes_5BL_FC8AB1380 N 0.000
Traes_5DL_FC7D15A05 Triticum aestivum Traes_5DL_FC7D15A05 N 0.000
Traes_5DS_E9D675FAC Triticum aestivum Traes_5DS_E9D675FAC N 0.000