CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2DS_93EAEC654
(
Triticum aestivum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Traes_2DS_93EAEC654
T068647_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK00315.1
M01153_2.00
Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN
PBM
Lambert et al.(2019)
pTH10085
0.846
0.968
PK16335.1
M01157_2.00
Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN
PBM
Lambert et al.(2019)
pTH10187
0.846
0.952
AtbZIP52
M06746_2.00
Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a
0.832
0.887
AtbZIP52
M06747_2.00
Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP52_col_v31
0.832
0.887
BZIP18
M01777_2.00
Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN
PBM
Weirauch et al.(2014)
pTH7316
0.831
0.919
BZIP18
M06768_2.00
Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH
Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a
0.831
0.919
BZIP18
M06769_2.00
Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP18_col_v31
0.831
0.919
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2DS_93EAEC654.2
bZIP
13
74
DPKRAKRILANRQSAARSKERKARYITELERKVHTLQTEATTLSAQLTLFQRDTTGLSAENT
Links
Other
bZIP
family TFs
Other
Triticum aestivum
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M378DRAFT_532189
Amanita muscaria
M378DRAFT_532189
I
CC1G_08877
Coprinopsis cinerea
CC1G_08877
I
GALMADRAFT_127348
Galerina marginata
GALMADRAFT_127348
I
M413DRAFT_444305
Hebeloma cylindrosporum
M413DRAFT_444305
I
K443DRAFT_684663
Laccaria amethystina
K443DRAFT_684663
I
LACBIDRAFT_295582
Laccaria bicolor
LACBIDRAFT_295582
I
Moror_1810
Moniliophthora roreri
Moror_1810
I
PILCRDRAFT_629612
Piloderma croceum
PILCRDRAFT_629612
I
PUNSTDRAFT_146509
Punctularia strigosozonata
PUNSTDRAFT_146509
N
SCHCODRAFT_114363
Schizophyllum commune
SCHCODRAFT_114363
D