Carubv10001247m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10001247m.g T071538_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GBF2
M01781_2.00 		Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV		 PBM
Weirauch et al.(2014)
pTH7258 		0.866 0.922
Q40645_ORYSA
M10050_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OSBZ8_Q6 		0.855 0.703
Q41109_PHAVU
M10078_2.00 		Phaseolus vulgaris Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ROM_Q2 		0.853 0.672
PK09653.1
M01156_2.00 		Cannabis sativa
NNMCASVNNN
NNNBSTGKNN		 PBM
Lambert et al.(2019)
pTH10114 		0.850 0.656
TAF1_TOBAC
M10079_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_01 		0.837 0.703
TAF1_TOBAC
M10080_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAF1_Q2 		0.837 0.703
GBF3
M01779_2.00 		Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN		 PBM
Weirauch et al.(2014)
pTH7328 		0.832 0.734
GBF3
M06770_2.00 		Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH		 Dap-seq
OMalley et al.(2016)
GBF3_colamp 		0.832 0.734
GBF3
M06771_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
GBF3_col 		0.832 0.734
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.808 0.594
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.808 0.594
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.808 0.594
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.808 0.594
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.808 0.594
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.787 0.531
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.787 0.531
BZIP68
M01770_2.00 		Arabidopsis thaliana
BMCASGBND
HNVCSTGKV		 PBM
Weirauch et al.(2014)
pTH8192 		0.786 0.547
BZIP68
M06752_2.00 		Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH		 Dap-seq
OMalley et al.(2016)
bZIP68_col_a 		0.786 0.547
PK23964.1
M01160_2.00 		Cannabis sativa
DNKMCACGTV
BACGTGKMNH		 PBM
Lambert et al.(2019)
pTH10151 		0.786 0.609
CPRF3_PETCR
M10071_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_01 		0.785 0.484
CPRF3_PETCR
M10072_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF3_Q2 		0.785 0.484
CPRF1_PETCR
M10066_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_01 		0.784 0.609
CPRF1_PETCR
M10067_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF1_Q2 		0.784 0.609
CPRF1_PETCR
M10068_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CPRF_Q2 		0.784 0.609
EmBP-1
M02659_2.00 		Triticum aestivum
CCACGTSW
WSACGTGG		 SELEX
Mathelier et al.(2014)
MA0128.1 		0.783 0.609
EMBP1_WHEAT
M09921_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_02 		0.783 0.609
EMBP1_WHEAT
M09922_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EMBP1_Q2 		0.783 0.609
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10001247m bZIP 247 310

Links

Other bZIP family TFs
Other Capsella rubella TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_06946 Arthroderma benhamiae ARB_06946 I 0.000
MCYG_06710 Arthroderma otae MCYG_06710 I 0.000
fgenesh1_pg.00866_#_590 Aspergillus carbonarius fgenesh1_pg.00866_#_590 I 0.000
ACLA_002460 Aspergillus clavatus CADACLAG00000308 I 0.000
CADAFLAG00010556 Aspergillus flavus CADAFLAG00010556 I 0.000
AFUA_5G02690 Aspergillus fumigatus CADAFUAG00002913 I 0.000
ANIA_08125 Aspergillus nidulans CADANIAG00004158 D 0.000
CADANGAG00002516 Aspergillus niger CADANGAG00002516 I 0.000
CADAORAG00009712 Aspergillus oryzae CADAORAG00009712 I 0.000
EURHEDRAFT_520686 Aspergillus ruber EURHEDRAFT_520686 I 0.000
ATEG_09236 Aspergillus terreus CADATEAG00001412 I 0.000
M437DRAFT_58469 Aureobasidium melanogenum M437DRAFT_58469 N 0.000
M438DRAFT_301524 Aureobasidium pullulans M438DRAFT_301524 N 0.000
AUEXF2481DRAFT_200600 Aureobasidium subglaciale AUEXF2481DRAFT_200600 N 0.000
BDDG_08856 Blastomyces dermatitidis BDDG_08856 I 0.000
PVAR5_0633 Byssochlamys spectabilis PVAR5_0633 I 0.000
A1O1_01819 Capronia coronata A1O1_01819 I 0.000
A1O3_00396 Capronia epimyces A1O3_00396 I 0.000
PV04_04557 Capronia semiimmersa PV04_04557 I 0.000
Z519_08384 Cladophialophora bantiana Z519_08384 I 0.000
G647_03978 Cladophialophora carrionii G647_03978 I 0.000
PV07_05656 Cladophialophora immunda PV07_05656 I 0.000
A1O5_01110 Cladophialophora psammophila A1O5_01110 I 0.000
A1O7_04704 Cladophialophora yegresii A1O7_04704 I 0.000
CIMG_06468 Coccidioides immitis CIMG_06468 I 0.000
CPC735_029590 Coccidioides posadasii CPC735_029590 I 0.000
HMPREF1541_08621 Cyphellophora europaea HMPREF1541_08621 N 0.000
A1O9_01846 Exophiala aquamarina A1O9_01846 I 0.000
HMPREF1120_03270 Exophiala dermatitidis HMPREF1120_03270 I 0.000
PV10_03900 Exophiala mesophila PV10_03900 I 0.000
PV06_06348 Exophiala oligosperma PV06_06348 I 0.000
PV11_01791 Exophiala sideris PV11_01791 I 0.000
PV08_08649 Exophiala spinifera PV08_08649 I 0.000
PV05_02224 Exophiala xenobiotica PV05_02224 I 0.000
Z517_06543 Fonsecaea pedrosoi Z517_06543 I 0.000
HCBG_06419 Histoplasma capsulatum HCBG_06419 I 0.000
MCYG_06710 Microsporum canis MCYG_06710 I 0.000
MGYG_03929 Microsporum gypseum MGYG_03929 I 0.000
NFIA_039400 Neosartorya fischeri CADNFIAG00003283 I 0.000
PABG_05434 Paracoccidioides brasiliensis PABG_05434 I 0.000
PAAG_12364 Paracoccidioides sp lutzii PAAG_12364 I 0.000
Pc21g15300 Penicillium chrysogenum Pc21g15300 I 0.000
PEX1_053360 Penicillium expansum PEX1_053360 I 0.000
PITC_049470 Penicillium italicum PITC_049470 I 0.000
PMAA_080950 Penicillium marneffei PMAA_080950 I 0.000
PMAA_058600 Penicillium marneffei PMAA_058600 I 0.000
PDE_09881 Penicillium oxalicum PDE_09881 I 0.000
PCH_Pc21g15300 Penicillium rubens PCH_Pc21g15300 I 0.000
U727_00430462281 Penicillium solitum U727_00430462281 I 0.000
Z518_00867 Rhinocladiella mackenziei Z518_00867 I 0.000
PMAA_058600 Talaromyces marneffei PMAA_058600 I 0.000
PMAA_080950 Talaromyces marneffei PMAA_080950 I 0.000
TSTA_115520 Talaromyces stipitatus TSTA_115520 I 0.000
TSTA_013230 Talaromyces stipitatus TSTA_013230 I 0.000
TEQG_04271 Trichophyton equinum TEQG_04271 I 0.000
H101_02186 Trichophyton interdigitale H101_02186 I 0.000
H102_04486 Trichophyton rubrum H102_04486 I 0.000
H105_04510 Trichophyton soudanense H105_04510 I 0.000
TESG_00349 Trichophyton tonsurans TESG_00349 I 0.000
TRV_05915 Trichophyton verrucosum TRV_05915 I 0.000
UREG_03950 Uncinocarpus reesii UREG_03950 I 0.000