CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000435971
(
Malus domestica
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
MDP0000435971
T072208_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20942.1
M01159_2.00
Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN
PBM
Lambert et al.(2019)
pTH11276
0.851
0.877
AT1G06070
M06744_2.00
Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP69_col_a
0.851
0.877
AT1G06070
M06745_2.00
Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA
Dap-seq
OMalley et al.(2016)
bZIP69_colamp_a
0.851
0.877
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000435971
bZIP
229
285
DPKRAKRIWANRQSAARSKERKMRYIAELEQKVQTLQTEATSLSAQLTLLQDISDYS
Links
Other
bZIP
family TFs
Other
Malus domestica
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_100594.1
Arabidopsis lyrata
scaffold_100594.1
I
0.851
AT1G06070
Arabidopsis thaliana
AT1G06070
D
0.851
Bostr.25219s0353
Boechera stricta
Bostr.25219s0353
I
0.851
Bo5g007170
Brassica oleracea
Bo5g007170
I
0.840
Bo8g005940
Brassica oleracea
Bo8g005940
I
0.851
Bra015471
Brassica rapa
Bra015471
I
0.840
Bra030637
Brassica rapa
Bra030637
I
0.840
PK20942.1
Cannabis sativa
PK20942.1
D
0.851
Cagra.1671s0236
Capsella grandiflora
Cagra.1671s0236
I
0.851
Carubv10008993m.g
Capsella rubella
Carubv10008993m.g
I
0.851
Ca_02692
Cicer arietinum
Ca_02692
I
0.851
Cla022204
Citrullus lanatus
Cla022204
I
0.851
Cla022201
Citrullus lanatus
Cla022201
I
0.851
Cucsa.251880
Cucumis sativus
Cucsa.251880
I
0.851
Cucsa.062530
Cucumis sativus
Cucsa.062530
I
0.851
Eucgr.D00737
Eucalyptus grandis
Eucgr.D00737
I
0.840
Thhalv10007692m.g
Eutrema salsugineum
Thhalv10007692m.g
I
0.851
gene23487-v1.0-hybrid
Fragaria vesca
gene23487-v1.0-hybrid
I
0.851
GLYMA12G05520
Glycine max
GLYMA12G05520
I
0.851
GLYMA13G42030
Glycine max
GLYMA13G42030
I
0.851
GLYMA15G03350
Glycine max
GLYMA15G03350
I
0.851
GLYMA11G13510
Glycine max
GLYMA11G13510
I
0.851
Gorai.011G140400
Gossypium raimondii
Gorai.011G140400
I
0.837
Gorai.006G229500
Gossypium raimondii
Gorai.006G229500
I
0.852
Gorai.005G015900
Gossypium raimondii
Gorai.005G015900
I
0.850
MLOC_64781
Hordeum vulgare
MLOC_64781
I
0.838
Lus10008150.g
Linum usitatissimum
Lus10008150.g
I
0.851
Lus10019376.g
Linum usitatissimum
Lus10019376.g
I
0.844
chr3.CM0106.340.nd
Lotus japonicus
chr3.CM0106.340.nd
I
0.851
MDP0000234166
Malus domestica
MDP0000234166
I
0.803
cassava43164.valid.m1
Manihot esculenta
cassava43164.valid.m1
I
0.851
cassava32399.m1
Manihot esculenta
cassava32399.m1
I
0.851
OB09G23080
Oryza brachyantha
OB09G23080
I
0.838
OGLUM09G17020
Oryza glumaepatula
OGLUM09G17020
I
0.838
OMERI09G12160
Oryza meridionalis
OMERI09G12160
I
0.838
RF2A
Oryza sativa
OS09G0516200
I
0.838
POPTR_0017s05610
Populus trichocarpa
POPTR_0017s05610
I
0.851
Pm007522
Prunus mume
Pm007522
I
0.850
Solyc06g053350.2
Solanum lycopersicum
Solyc06g053350.2
I
0.840
TCM_019998
Theobroma cacao
TCM_019998
I
0.851
Traes_7DS_47B5A7FFF
Triticum aestivum
Traes_7DS_47B5A7FFF
I
0.810
TRIUR3_16287
Triticum urartu
TRIUR3_16287
I
0.810
VIT_05s0102g01120
Vitis vinifera
VIT_05s0102g01120
I
0.851