Pavir.Da01931 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Da01931 T072360_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ABF3
M01782_2.00 		Arabidopsis thaliana
ACACGTGT
ACACGTGT		 PBM
Weirauch et al.(2014)
pTH7240 		0.805 0.742
ABF3
M09912_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF3_Q2 		0.805 0.742
OS08G0471950
M10047_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TRAB1_Q2 		0.797 0.661
ABF4
M01056_2.00 		Arabidopsis thaliana
NNMCACGTGKNN
NNMCACGTGKNN		 PBM
Sullivan et al.(2014)
pTH7315 		0.796 0.613
ABF4
M01057_2.00 		Arabidopsis thaliana
NDMYAVNWNN
NNWNBTRKHN		 PBM
Sullivan et al.(2014)
pTH7551 		0.796 0.613
ABF4
M09911_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF4_Q2 		0.796 0.613
ABF1
M01772_2.00 		Arabidopsis thaliana
NNMCACGTGNN
NNCACGTGKNN		 PBM
Weirauch et al.(2014)
pTH8837 		0.790 0.597
ABF1
M01773_2.00 		Arabidopsis thaliana
NMCACGTGKN
NMCACGTGKN		 PBM
Weirauch et al.(2014)
pTH8853 		0.790 0.597
ABF1
M02656_2.00 		Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC
GRHCACGTGGCVVVVVVVV		 SELEX
Mathelier et al.(2014)
MA0570.1 		0.790 0.597
ABF1
M09906_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_01 		0.790 0.597
ABF1
M09907_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_02 		0.790 0.597
ABF1
M09908_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABF1_03 		0.790 0.597
PK18009.1
M01158_2.00 		Cannabis sativa
NNACACGTGN
NCACGTGTNN		 PBM
Lambert et al.(2019)
pTH10272 		0.786 0.613
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Da01931.1.p bZIP 261 323

Links

Other bZIP family TFs
Other Panicum virgatum TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.793
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.802
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.782
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.792
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.805
ABF1 Arabidopsis thaliana AT1G49720 D 0.790
ABI5 Arabidopsis thaliana AT2G36270 D 0.794
ABF4 Arabidopsis thaliana AT3G19290 D 0.796
ABF3 Arabidopsis thaliana AT4G34000 D 0.805
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.794
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.805
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.808
BRADI3G57960 Brachypodium distachyon BRADI3G57960 N 0.786
Bo1g007700 Brassica oleracea Bo1g007700 I 0.818
Bo3g073080 Brassica oleracea Bo3g073080 I 0.790
Bo5g115300 Brassica oleracea Bo5g115300 I 0.789
Bo7g116570 Brassica oleracea Bo7g116570 I 0.810
Bra022409 Brassica rapa Bra022409 I 0.789
Bra037533 Brassica rapa Bra037533 I 0.789
PK02169.1 Cannabis sativa PK02169.1 I 0.799
PK18009.1 Cannabis sativa PK18009.1 D 0.786
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.784
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.805
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.782
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.792
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.805
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.784
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.792
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.802
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.789
Ca_01548 Cicer arietinum Ca_01548 I 0.797
Cla022926 Citrullus lanatus Cla022926 I 0.798
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.800
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.802
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.802
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.812
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.800
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.785
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.798
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.799
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.783
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.782
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.789
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.790
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.811
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.795
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.797
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.797
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.791
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.825
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.795
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.787
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.790
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.794
MLOC_20326 Hordeum vulgare MLOC_20326 N 0.826
MLOC_53580 Hordeum vulgare MLOC_53580 N 0.792
LPERR06G06440 Leersia perrieri LPERR06G06440 I 0.818
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.801
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.789
Lus10002399.g Linum usitatissimum Lus10002399.g I 0.783
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.799
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.799
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.791
MDP0000248567 Malus domestica MDP0000248567 I 0.794
MDP0000296303 Malus domestica MDP0000296303 I 0.799
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.799
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.799
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.800
mgf002047m Mimulus guttatus mgf002047m I 0.794
mgf007524m Mimulus guttatus mgf007524m I 0.794
mgf014602m Mimulus guttatus mgf014602m I 0.794
mgf015092m Mimulus guttatus mgf015092m I 0.783
mgf020824m Mimulus guttatus mgf020824m I 0.794
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.830
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.784
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.810
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.788
OBART02G33770 Oryza barthii OBART02G33770 I 0.801
OBART06G07070 Oryza barthii OBART06G07070 I 0.818
OB02G40680 Oryza brachyantha OB02G40680 I 0.789
OB06G16510 Oryza brachyantha OB06G16510 I 0.818
OB08G24950 Oryza brachyantha OB08G24950 I 0.805
OB09G19140 Oryza brachyantha OB09G19140 I 0.782
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.798
ORGLA06G0066000 Oryza glaberrima ORGLA06G0066000 I 0.818
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.801
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.794
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.794
OGLUM06G07500 Oryza glumaepatula OGLUM06G07500 I 0.818
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.799
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.794
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.794
BGIOSGA022536 Oryza indica BGIOSGA022536 I 0.818
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.801
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.794
BGIOSGA040605 Oryza indica BGIOSGA040605 I 0.818
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.790
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.823
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.794
OMERI06G08210 Oryza meridionalis OMERI06G08210 I 0.818
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.794
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.794
ONIVA06G08350 Oryza nivara ONIVA06G08350 I 0.818
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.790
OPUNC06G06690 Oryza punctata OPUNC06G06690 I 0.818
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.801
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.794
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.794
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.801
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.861
BZIP23 Oryza sativa OS02G0766700 I 0.794
BZIP46 Oryza sativa OS06G0211200 I 0.861
OS08G0471950 Oryza sativa OS08G0471950 D 0.797
OS09G0456200 Oryza sativa OS09G0456200 I 0.794
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.792
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I 0.823
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.788
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.789
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.831
Pavir.J05659 Panicum virgatum Pavir.J05659 I 0.815
Pavir.J06257 Panicum virgatum Pavir.J06257 I 0.787
Pavir.J31353 Panicum virgatum Pavir.J31353 I 0.815
Pavir.J36143 Panicum virgatum Pavir.J36143 I 0.787
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.799
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.799
Pm001315 Prunus mume Pm001315 I 0.787
Pm005288 Prunus mume Pm005288 I 0.787
Pm021430 Prunus mume Pm021430 I 0.795
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.791
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.795
29625.m000702 Ricinus communis 29625.m000702 I 0.799
29801.m003176 Ricinus communis 29801.m003176 I 0.821
30170.m013868 Ricinus communis 30170.m013868 I 0.799
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.799
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.795
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.799
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.795
Si001731m.g Setaria italica Si001731m.g I 0.782
Si003247m.g Setaria italica Si003247m.g I 0.823
Si006889m.g Setaria italica Si006889m.g I 0.872
Si013904m.g Setaria italica Si013904m.g I 0.786
Si017618m.g Setaria italica Si017618m.g I 0.813
Si030114m.g Setaria italica Si030114m.g I 0.799
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.798
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.812
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.784
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.802
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.812
Sb03g040970 Sorghum bicolor Sb03g040970 I 0.823
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.836
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.798
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.805
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.789
Sb10g007090 Sorghum bicolor Sb10g007090 I 0.822
TCM_007074 Theobroma cacao TCM_007074 I 0.794
TCM_022574 Theobroma cacao TCM_022574 I 0.789
TCM_033824 Theobroma cacao TCM_033824 I 0.794
Traes_6AL_E8CD2C02B Triticum aestivum Traes_6AL_E8CD2C02B N 0.792
Traes_7DS_C6A3C10A6 Triticum aestivum Traes_7DS_C6A3C10A6 N 0.826
TRIUR3_23754 Triticum urartu TRIUR3_23754 N 0.826
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.782
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.814
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.795
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.796
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.872
GRMZM2G132868 Zea mays GRMZM2G132868 I 0.787
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.805
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.805
GRMZM5G858197 Zea mays GRMZM5G858197 I 0.823