CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPAL_0000284800
(
Strongyloides papillosus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
SPAL_0000284800
T075165_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Crem
M01821_2.00
Mus musculus
NRTKACGTMN
NKACGTMAYN
PBM
Weirauch et al.(2014)
pTH5002
0.866
0.762
Crem
M08845_2.00
Mus musculus
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C
0.866
0.762
Creb1
M00992_2.00
Mus musculus
NNTGACGTCV
BGACGTCANN
PBM
Mann et al.(2013)
CREB1_UM_HK
0.855
0.762
Creb1
M01806_2.00
Mus musculus
VTKACGHNN
NNDCGTMAB
PBM
Weirauch et al.(2014)
pTH5080
0.855
0.762
CREB1
M04264_2.00
Homo sapiens
NVTKACGTMABN
NVTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX
0.855
0.762
CREB1
M04258_2.00
Homo sapiens
NVTKACGTMANN
NNTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1
0.855
0.762
CREB1
M04259_2.00
Homo sapiens
NRTGACGTR
YACGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2
0.855
0.762
CREB1
M04260_2.00
Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3
0.855
0.762
CREB1
M04022_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1
0.855
0.762
CREB1
M04023_2.00
Homo sapiens
RTGACGTADB
VHTACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2
0.855
0.762
CREB1
M08066_2.00
Homo sapiens
NVTGACGTCABN
NVTGACGTCABN
ChIP-seq
Mathelier et al.(2014)
MA0018.3
0.855
0.762
CREB1
M08791_2.00
Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A
0.855
0.762
Creb1
M08824_2.00
Mus musculus
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A
0.855
0.762
CREB1
M09948_2.00
Homo sapiens
TGACGTMW
WKACGTCA
Transfac
Matys et al.(2006)
V$CREB_01
0.855
0.762
CREB1
M09949_2.00
Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV
Transfac
Matys et al.(2006)
V$CREB_02
0.855
0.762
CREB1
M09950_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q3
0.855
0.762
CREB1
M09951_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q6
0.855
0.762
CREB1
M09952_2.00
Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q2
0.855
0.762
CREB1
M09953_2.00
Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q4
0.855
0.762
CREB1
M09954_2.00
Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM
Transfac
Matys et al.(2006)
V$TAXCREB_01
0.855
0.762
CREB1
M09955_2.00
Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY
Transfac
Matys et al.(2006)
V$TAXCREB_02
0.855
0.762
Creb1
M00991_2.00
Mus musculus
NNRTGACGYVN
NBRCGTCAYNN
PBM
Mann et al.(2013)
CREB1_M_HK
0.855
0.762
CREB1
M04265_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX
0.855
0.762
CREB1
M04261_2.00
Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1
0.855
0.762
CREB1
M04262_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2
0.855
0.762
CREB1
M04263_2.00
Homo sapiens
NRTGACGYV
BRCGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3
0.855
0.762
ATF1
M08792_2.00
Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD
Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B
0.853
0.762
ATF1
M09485_2.00
Homo sapiens
NVTGACGTMA
TKACGTCABN
Misc
Heinz et al.(2010)
K562-ATF1_GSE31477
0.853
0.762
ATF1
M09956_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q3
0.853
0.762
ATF1
M09957_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6_01
0.853
0.762
ATF1
M09958_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6
0.853
0.762
CREM
M04229_2.00
Homo sapiens
VVTBACGTVABN
NVTBACGTVABB
SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX
0.845
0.683
CREM
M08784_2.00
Homo sapiens
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C
0.845
0.683
CREM
M09930_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6_01
0.845
0.683
CREM
M09931_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6
0.845
0.683
CREM
M04230_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX
0.845
0.683
Atf1
M00124_2.00
Mus musculus
NNNNDNDNNN
NNNHNHNNNN
PBM
Badis et al.(2009)
Atf1_3026
0.843
0.746
Atf1
M01804_2.00
Mus musculus
RTGACGTV
BACGTCAY
PBM
Weirauch et al.(2014)
pTH5005
0.843
0.746
Atf1
M08820_2.00
Mus musculus
VTGACGTSAV
BTSACGTCAB
Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B
0.843
0.746
CrebB-17A
M03659_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_1
0.834
0.778
CrebB-17A
M03660_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_2
0.834
0.778
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAL_0000284800.1
bZIP
222
284
DSTKKRQVRLMKNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTLKELYCQKGKPE
Links
Other
bZIP
family TFs
Other
Strongyloides papillosus
TFs
359 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI009066
Acyrthosiphon pisum
ACYPI009066
I
ACOM027831
Anopheles coluzzii
ACOM027831
I
ACUA024394
Anopheles culicifacies
ACUA024394
I
ADIR009095
Anopheles dirus
ADIR009095
I
AEPI006937
Anopheles epiroticus
AEPI006937
I
AFAF013318
Anopheles farauti
AFAF013318
I
AFUN007089
Anopheles funestus
AFUN007089
I
AMAM004080
Anopheles maculatus
AMAM004080
I
AMEC019428
Anopheles melas
AMEC019428
I
AMEM005044
Anopheles merus
AMEM005044
I
AMIN010749
Anopheles minimus
AMIN010749
I
AQUA000302
Anopheles quadriannulatus
AQUA000302
I
ASTEI10188
Anopheles stephensi
ASTEI10188
I
GB42329
Apis mellifera
GB42329
I
ENSAMXG00000015564
Astyanax mexicanus
ENSAMXG00000015564
I
ENSAMXG00000004883
Astyanax mexicanus
ENSAMXG00000004883
I
ACEP22936
Atta cephalotes
ACEP22936
I
Cflo_00069--XP_001120971.1_APIME
Camponotus floridanus
Cflo_00069--XP_001120971.1_APIME
I
ENSCHOG00000011948
Choloepus hoffmanni
ENSCHOG00000011948
I
CLEC011277
Cimex lectularius
CLEC011277
I
YQE_09206
Dendroctonus ponderosae
YQE_09206
I
nfe2
Gasterosteus aculeatus
ENSGACG00000009442
I
ENSLACG00000009960
Latimeria chalumnae
ENSLACG00000009960
I
LCUP007174
Lucilia cuprina
LCUP007174
I
MYCTH_73708
Myceliophthora thermophila
MYCTH_73708
I
NCU05294
Neurospora crassa
NCU05294
D
estExt_Genewise1.C_120294
Neurospora discreta
estExt_Genewise1.C_120294
I
NEUTE1DRAFT_121594
Neurospora tetrasperma
NEUTE1DRAFT_121594
I
NFE2L3
Ochotona princeps
ENSOPRG00000011680
I
ENSONIG00000012253
Oreochromis niloticus
ENSONIG00000012253
I
ENSPMAG00000002714
Petromyzon marinus
ENSPMAG00000002714
I
ENSPFOG00000008177
Poecilia formosa
ENSPFOG00000008177
I
ENSPFOG00000001795
Poecilia formosa
ENSPFOG00000001795
I
Sakowv30004446m.g
Saccoglossus kowalevskii
Sakowv30004446m.g
I
SINV19778
Solenopsis invicta
SINV19778
I
SMAC_01696
Sordaria macrospora
SMAC_01696
I
nfe2
Tetraodon nigroviridis
ENSTNIG00000015046
I
THITE_2115656
Thielavia terrestris
THITE_2115656
I
TC004149
Tribolium castaneum
TC004149
I
ENSXMAG00000008083
Xiphophorus maculatus
ENSXMAG00000008083
I